Pseudomonas fluorescens PICF7, PFLUOLIPICF7_RS08410
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas fluorescens PICF7, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
CCGCCATCATCTGCGGAAAAGTCATCATTGGCGAAAACGTTTTCGTCGGGCCCTACGCTGTGATCCGTGCCGACGAAGTCGACGCCAGCGGTGGTATGGA CCCGATCGTCATCGGCGCCAACTCCAATATCCAGGACGGCGTGGTCATCCACTCCAAGTCCGGCGCGGCGGTGACGATCGGCGAGTTCACGTCCATTGCA CACCGTTCCATCGTCCACGGCCCCTGCACCGTCGGCGACCGTGTGTTTATCGGTTTCAACAGCGTGTTGTTCAACTGCGCCGTGGGCGACGGCTGCGTGG TGCGCCACAACTCGGTGGTCGACGGCCGCGACTTGCCCGCCGCGTTCTATGTGCCCTCCACGACCCGCATCGGGCCACACACCGACCTCTCGCAGTTCCC CCCCGTGAGCGTCAGCGCCTCGGAATTTTCCGAAGACGTGGCACGCACCAACGTTGATTTGGTGCGCGGCTACAAAGCCCTGCAAAACGAGTTCTGAACC
|
|
| DNA Sequence for Gene |
>PFLUOLIPICF7_RS08410
ATGAGCCGCCTGCTGATCCGCAACGCCCGCCTGGTGAACGAAGGCCAGGAATTCGACGCCGATGTGCTGGTCGCCAATGGCCGTATCGAGAAAATTGCCA GCAGCCTGCAAGGCTACAACGAGCCCGTGGAAATCGACGCTCAAGGCCAATGGCTGCTACCCGGAATGATCGATGACCAAGTGCACTTTCGCGAACCTGG CGCGCCGGAAAAAGGCAGTTTCTACAGCGAATCCAGGGCAGCGGTAGCCGGTGGTATCACCAGCTTCATGGACATGCCCAACACCCATCCCGCCACCCTT GACCTGGATGCCCTGACCGACAAGAAACGCCGCGCCGCCCTGCACTCGGTAGCCAACTATGGCTTTCACTTCGGCGTAAGCAACGACAACCTCGACACCG TCGCCGCCCTCGACCCGCGCGAGGTGGCCGGGGTCAAAGTGTTCATGGGCGCTTCGACCGGCAATATGTTGGTCGACGATCCGCGGATCCTGGAACGCCT GTTTGCCGAAGTTCCCACGATTCTGCTGGCCCATTGCGAACACACACCAAGCATCCAGGCCAATGAAGCGCGGCTGCGTGAGCGTTTCGGCGAGCATATC CCCGCCGTCGCGCACCCGCTGATCCGCGATGCCGAGGCATGCTATCGCTCTTCATCCTTTGCGGTGGAATTGGCCAAGCGCCACGGCACCCGCCTGCATG TGCTGCACCTGACCAGCGCACGCGAGCTGGCGCTGTTCGAAGACAAACCCTTGAGCAAAAAACGCATCACCGCCGAAGTCTGCCTGCACCACTTGATGTT CGATGACCGCGACTACCACCGCCTCGGCCATCAGATCAAATGCAACCCGGCGATCAAGACCCGCGCCGACCGCGACGCCTTGCGTCAAGCCTTGTTGAGT GATCGTCTGGACGTGATTGGCAGTGACCATGCGCCGCATACGTGGGCACAAAAACAGTTGCGTTATCGCGAGGCGCCGTCGGGATTACCCCTGGTGCAGC ACGCGCTGCCGGCGTTGTTGGAGTTGGTGGCCGACGAGCTGCTGCCGCTGACCACCCTGGTGGCGAAAACCAGTCACCGTGTGGCCGACTTGTTCGCCAT CCCGGATCGCGGCTACCTACGTGAGGGTTATTGGGCCGACCTGGTGTTAATCAAACCGGAGCCCGAAGGCAAACCCGTCAGCAGCCAGCCGATCCTGGCC CGCTGCGGTTGGACGCCCTTCGCCGAACGCAGCTTTCGCCACAGCGTCAGCACCACCCTGGTTTCCGGCCACTTGGCCTGGCACAACGGTCAGGTCGTCG ACAGTTGCCAGGGTCTGCCTCTGCACTTTGAGCGCTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
CCCCACGCACACCTGTAGGCGCAAGCTCGCGCCTACAGAGGGGGAAGTCAGGCGCGAGGCTTGACCGTTCCGCAATCGTTGCCCAGCCACTGGGCATGGC TGTCCAGGCTGCCCTTCTGCTGAATGCCAGTGGCATTGAAGGTGCCGTTGACGGTGGTGCTGAATTCTTTCTGGCTTTGGAAGGTAGCGACGCCAGTGCC CTGGGCTTTCGGGCAACTGAAGCGGAATTTCCACTGATTGCCGGTCTTGTAGGTCACTTCCTGTTTGCAGCCCGATTGTGGGTCGGTCAGCGGGATCGAA TCGGAGGCGACTTGAGCTGGGGTCAGGCACACCTGCACGCCTTTACCGGCCATGGTGATGCCTTGTTTTTCCAGCATGGCGCGCTGTTCCGGGGTCATCT GTTGCTTAAGCTGACCGAGGATCAGCGACAGGTCCGGCAGGTCCTGGTTATCGACTTTCATATTGCTGGTGGTCAGTTCCCACAAGCCCGGCGCCAGCAT
|
|
| Amino Acid Sequence |
>dihydroorotase
MSRLLIRNARLVNEGQEFDADVLVANGRIEKIASSLQGYNEPVEIDAQGQWLLPGMIDDQVHFREPGAPEKGSFYSESRAAVAGGITSFMDMPNTHPATL DLDALTDKKRRAALHSVANYGFHFGVSNDNLDTVAALDPREVAGVKVFMGASTGNMLVDDPRILERLFAEVPTILLAHCEHTPSIQANEARLRERFGEHI PAVAHPLIRDAEACYRSSSFAVELAKRHGTRLHVLHLTSARELALFEDKPLSKKRITAEVCLHHLMFDDRDYHRLGHQIKCNPAIKTRADRDALRQALLS DRLDVIGSDHAPHTWAQKQLRYREAPSGLPLVQHALPALLELVADELLPLTTLVAKTSHRVADLFAIPDRGYLREGYWADLVLIKPEPEGKPVSSQPILA RCGWTPFAERSFRHSVSTTLVSGHLAWHNGQVVDSCQGLPLHFER
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|