Pseudomonas fluorescens PICF7, PFLUOLIPICF7_RS08185
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas fluorescens PICF7, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
GTCAATTTCCAACCAGCTTTTCCTTTAATTAGATATCTACCGGTCATTTACCTTTTTCTGTCCGCTTGGCTTTCTTGGCTCGTGGCATAGATATAAAAAT AAAGAAGGAAGTTATTTAAAGCTTTTCTGTAAAGCTTATAAAAGCTAGGCAGGCAATCATCTGTGGATAACTGCATTGAGGCCTTGTTCCACCTGATGTA CAGAGAATGACAACACGGGGGAGAAACGGTGCTCTGCCTGTGCTGCGCTGTCGGATAAGCTGTGTGTGGAATGGCGAGTTATCCACAGGCCAGTTACCCA CAGACTTTTGACCCCACTTGTACAACGACCTCAAGGGCGCTTATCCACAGAGCTTATGCACAGACCATTGGTCGCCTTTATTGCTGTTAAGACGTTGATT TTGGCTGGCCTGTGATCAACCTACATGTGGATAAGTGGGCGGCTCGCCGCTACAATGGCGGCTGTTTTTGCCTCACCGGCTTTCAACTTAGGGGATATCC
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| DNA Sequence for Gene |
>PFLUOLIPICF7_RS08185
GTGTCAGTGGAACTTTGGCAGCAGTGCGTGGAGCTTTTGCGCGAAGAGCTGCCTGCCCAGCAATTCAACACCTGGATCCGTCCGCTACAGGTCGAAGCCG AAGGCGACGAGTTGCGTGTCTACGCGCCCAATCGGTTTGTTCTTGACTGGGTCAACGAGAAGTACCTGAGCCGCGTTCTCGAATTGCTCGATGAACATGG CAACGGCCTCGCGCCCGTGCTCTCCTTATTAATAGGCAGCAAACGTAGCTCGGCGCCTCGTGCTGCGCCGAATGCGCCTCTGGCGGCGGCTGCGTCGCAA GCCCAGGCGGCAGCGGCACCGGCTGTCAGTGCGCCGTCTCCTGCTCCTGCGCCCTCCAAGTCGTCTGCGCAAAAAAATGCACCAGAGAATGAAGAGCCGT CCCGCGACAGCTTTGATCCGATGGCAGGCGCGGCCTCCCAGCAAGCTCCGGTACGCGCCGAACAGCGCACCGTGCAGGTCGAAGGCGCGCTCAAGCACAC CAGCTACCTGAACCGCACCTTTACCTTTGAGAACTTCGTCGAAGGTAAATCCAACCAGCTGGCCCGTGCTGCCGCCTGGCAGGTAGCCGATAACCCCAAG CATGGTTACAACCCACTCTTCCTTTATGGTGGCGTTGGCTTGGGTAAGACCCACTTGATGCACGCTGTGGGTAACCACCTATTAAAGAAGAATCCGAATG CCAAGGTCGTGTACCTGCATTCGGAGCGCTTCGTGGCTGACATGGTCAAGGCGTTGCAGCTCAACGCAATCAACGAGTTCAAGCGGTTCTACCGCTCGGT TGATGCGTTGCTGATCGACGACATTCAATTTTTTGCCCGCAAAGAGCGCTCCCAGGAAGAGTTCTTCCACACCTTCAACGCCCTGCTCGAAGGTGGCCAG CAGGTCATCTTGACCAGTGACCGTTATCCAAAAGAAATCGAAGGCCTGGAAGAACGCTTGAAATCGCGCTTCGGCTGGGGCTTGACCGTTGCGGTAGAGC CGCCGGAGCTGGAAACCCGCGTCGCGATCCTGATGAAAAAAGCCGACCAGGCCAAGGTCGACCTGCCCCACGATGCGGCGTTCTTCATCGCTCAACGCAT TCGCTCCAACGTGCGTGAGCTGGAAGGTGCACTCAAGCGGGTCATCGCTCACTCTCACTTCATGGGCCGCGATATCACCATCGAGCTGATTCGCGAATCC CTGAAGGACTTGCTGGCACTGCAGGACAAACTGGTGAGTGTGGATAACATCCAGCGCACCGTGGCCGAGTACTACAAGATCAAGATTTCCGACCTGCTGT CCAAGCGCCGCTCGCGCTCGGTGGCACGCCCCCGTCAGGTGGCCATGGCCCTCTCCAAGGAGTTGACCAACCACAGCCTGCCGGAAATCGGTGATGTGTT TGGCGGACGCGACCACACCACGGTCTTGCACGCGTGCCGCAAGATCAATGAACTTAAGGAATCCGACGCGGATATTCGCGAGGACTACAAGAACCTGCTG CGTACACTGACAACGTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TGACACCAGCGCAGCTTATTAAGGCAAGGGACTAGACCATGCATTTCACCATTCAACGCGAAGCCCTGTTGAAACCCCTGCAACTGGTCGCAGGCGTCGT CGAGCGCCGACAGACCTTGCCGGTGCTTTCCAACGTATTGCTGGTAGTCGAAGGCCAGCAATTGTCCTTGACCGGTACTGACCTGGAAGTCGAGCTGGTG GGTCGTGTGCAGCTGGAAGAGCCCGCCGAACCGGGCGAGATCACCGTACCCGCGCGCAAGCTGATGGACATCTGCAAAAGCCTGCCTAACGACGCGCTGA TCGACATCAAGGTTGATGAGGCGAAGTTGGTGGTCAAGGCGGGTCGCAGCCGCTTCACCCTGTCCACCCTGCCGGCCAATGATTTCCCGACAGTGGAAGA AGGCCCAGGCTCGCTGACCTGCAGCCTGGAGCAGAGCAAGCTGCGTCGTTTGATCGAGCGCACAAGCTTCGCCATGGCTCAGCAAGACGTGCGTTACTAC
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| Amino Acid Sequence |
>chromosomal replication initiator protein DnaA
MSVELWQQCVELLREELPAQQFNTWIRPLQVEAEGDELRVYAPNRFVLDWVNEKYLSRVLELLDEHGNGLAPVLSLLIGSKRSSAPRAAPNAPLAAAASQ AQAAAAPAVSAPSPAPAPSKSSAQKNAPENEEPSRDSFDPMAGAASQQAPVRAEQRTVQVEGALKHTSYLNRTFTFENFVEGKSNQLARAAAWQVADNPK HGYNPLFLYGGVGLGKTHLMHAVGNHLLKKNPNAKVVYLHSERFVADMVKALQLNAINEFKRFYRSVDALLIDDIQFFARKERSQEEFFHTFNALLEGGQ QVILTSDRYPKEIEGLEERLKSRFGWGLTVAVEPPELETRVAILMKKADQAKVDLPHDAAFFIAQRIRSNVRELEGALKRVIAHSHFMGRDITIELIRES LKDLLALQDKLVSVDNIQRTVAEYYKIKISDLLSKRRSRSVARPRQVAMALSKELTNHSLPEIGDVFGGRDHTTVLHACRKINELKESDADIREDYKNLL RTLTT
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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