Pseudomonas fluorescens PICF7, PFLUOLIPICF7_RS08170 (gyrB)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas fluorescens PICF7, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
AGTCTTTGAGCAGACCTTGAGTGAGTTGCTGGAACTCGAAGGGCTGACGCTGAGTTACTACCGTGGCTGGGACAAAGAACGTGAGCTGAGTGCAGTGCTC GCGACGTCCTTGCAGCGGGATCAGCAAATTGGCCATACCCAGGCCGGACCCCAACGGGCTGATTTGCGTCTTAGACTAGGCGCTCACAATGCCGCGGATA TTTTGTCCCGTGGTCAGCAGAAGTTGGTGGTGTGTGCATTGCGCATCGCCCAGGGCCATCTGGTTAGCCAGGCCCGGCGCGGTCAGTGTATTTATCTGGT GGATGACTTGCCGTCGGAGCTCGATGAGCAACACCGCCGCGCGTTATGCCGCTTGTTGGAAGAATTACGCTGCCAGGTGTTTATCACCTGTGTAGACCAC GAATTATTGAGGGAAGGCTGGCAGACGGAAACGCCAGTCGCTTTGTTCCACGTGGAACAAGGCCGTATCACCCAGACCCACGACCATCGGGAGTGAAGGC
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| DNA Sequence for Gene |
>PFLUOLIPICF7_RS08170
|gyrB
ATGAGCGAAGAAAACACGTACGACTCGACCAGCATTAAAGTGCTGAAAGGTTTGGATGCCGTACGCAAACGTCCCGGTATGTACATTGGCGACACTGATG ACGGTAGCGGTCTGCACCACATGGTGTTCGAGGTGGTCGACAACTCCATCGACGAAGCTCTGGCCGGTCACTGCGACGACATCAGCATCATCATCCACCC GGATGAGTCTATTACCGTGCGCGACAATGGTCGCGGCATTCCGGTAGACGTACACAAAGAAGAAGGCGTTTCGGCAGCAGAGGTCATCATGACCGTGCTC CACGCCGGCGGTAAGTTCGACGACAACTCCTATAAAGTTTCCGGCGGTCTGCACGGTGTGGGCGTTTCGGTAGTGAACGCTCTTTCTGAAGAGTTGATCC TGACTGTTCGCCGCAGTGGCAAGATCTGGGAACAGACCTACGTTCACGGTGTTCCAAAAGAACCGATGAAAATCGTCGGTGACAGTGAAACCACCGGTAC GCAGATCCACTTCAAGCCATCGGCTGAGACCTTCAAGAATATCCACTTTAGCTGGGACATCCTGGCCAAGCGTATTCGTGAACTGTCCTTCCTGAACTCC GGTGTGGGTATCGTCCTCAAGGATGAGCGCAGCGGTAAGGAAGAGCTGTTCAAGTATGAAGGTGGCCTGCGCGCATTCGTTGAATACCTGAACACCAACA AGACCGCGGTAAACCAGGTGTTCCACTTCAACATTCAGCGTGAAGACGGCATCGGCGTGGAAATCGCTCTGCAGTGGAACGACAGCTTCAACGAGAACCT GTTGTGCTTCACCAACAACATTCCTCAGCGCGACGGTGGTACTCACCTGGTGGGTTTCCGTTCCGCACTGACGCGTAACCTGAACACCTACATTGAAGCC GAAGGCCTGGCCAAAAAGCACAAAGTCGCCACCACCGGTGACGATGCCCGTGAAGGCCTGACCGCGATTATCTCGGTAAAAGTACCTGATCCGAAGTTCA GCTCTCAGACCAAAGACAAGCTGGTGTCTTCCGAAGTGAAGACTGCGGTGGAACAGGAGATGGGCAAGTACTTCTCCGACTTCCTGCTGGAGAACCCGAA CGAAGCCAAGCTGGTTGTCGGCAAGATGATCGACGCCGCGCGTGCTCGTGAAGCGGCGCGTAAAGCCCGTGAGATGACTCGTCGCAAAGGCGCGCTGGAT ATCGCAGGCTTGCCAGGCAAACTGGCTGACTGCCAAGAGAAGGACCCTGCCCTCTCCGAACTGTACCTGGTGGAAGGTGACTCTGCTGGCGGTTCCGCCA AGCAGGGTCGTAACCGTCGCACCCAAGCCATCCTGCCGTTGAAAGGCAAGATCCTCAACGTCGAGAAGGCTCGCTTCGACAAGATGATTTCCTCCCAGGA AGTCGGCACCTTGATCACGGCGTTGGGCTGCGGTATCGGCCGCGACGAGTACAACATCGACAAGTTGCGCTATCACAACATCATCATCATGACCGATGCT GACGTCGACGGTTCGCACATTCGTACGCTGCTGCTGACGTTCTTCTTCCGTCAGTTGCCGGAGTTGATCGAGCGTGGCTACATCTACATCGCTCAGCCGC CGTTATACAAAGTGAAAAAAGGCAAGCAAGAGCAATACATCAAAGACGACGACGCCATGGAAGAGTACATGACGCAGTCGGCTCTGGAAGATGCCAGCCT GCACTTGAACGACGAAGCGCCGGGCATTTCCGGTGAGTCGCTGGAACGTCTGGTAAACGACTTCCGCATGGTGATGAAGACCCTCAAGCGCCTGTCGCGT CTGTACCCTCAGGAATTGACCGAGCACTTCATCTACCTGCCGGCTGTCAGCCTTGAGCAATTGGGCGATCACGCAGCGATGCAAGATTGGCTGGCTCAGT ACGAGGTGCGCCTGCGTACCGTCGAGAAGTCTGGTCTGGTGTACAAGGCCAGCCTGCGAGAAGACCGTGAACGTAACGTGTGGCTGCCTGAGGTCGAACT GATCTCCCACGGTCTGTCGAACTACGTCACGTTCAACCGTGACTTCTTCGGCAGCAATGACTATAAGACCGTGGTAACGCTGGGCGCTCAACTGAGCACC CTGTTGGACGACGGCGCTTATATTCAGCGTGGCGAACGCAAGAAGCAGGTCAAGGAATTCAAGGAAGCCCTCGACTGGCTGATGGCGGAAAGCACCAAAC GTCACACCATTCAGCGATACAAAGGTCTGGGTGAAATGAACCCGGATCAGCTGTGGGAAACCACCATGGACCCTGCTCAGCGTCGCATGTTGCGTGTGAC CATCGAAGACGCCATTGGCGCAGACCAGATCTTCAACACCCTCATGGGTGATGCGGTCGAGCCTCGTCGTGACTTCATCGAGAGCAATGCCCTGGCGGTT TCCAACCTGGACTTCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TCCCCGTAAGCCCGTCAAACTAAAAAGGCCAACGCTTAAACGTTGGCCTTTTTTATTGGGTAAAACACGTTGATTTTTAAAATGCTCCACGTGGAACATC AGCACACTAACTTTGAGAAGCGGCCGCCACACTCTCCAACCGATAGCCATATCCATAGATGGTCAGCAACTGCCAACCCCGATCCGCCGTCAGCCCCAGT TTGTTTCTTAGCCGGTAGATATGTGTATCCAGCGGCCGTGAAGACACCATTTCTTCATGGGTCCAGAATCGCTCGTAGAGGTACTCGCGAGACAGCGGTC GCGCCAGGTTGGCAAACAGACAGCTAGCCAAGCGATACTCCCGTTCTGTGAGGTTGATGGGTTTTCCCGCTCGGGTCACCGTCAATTCGGCATCGTCAAA GGTCAAGTCGTTGAAGCTTTGCACTTCATGGCTAGCAGACTTCTGCAGGCCATGCCGACGCAGCACCGCCGTAACCCGTGCTTTCAGTTCATTGGGGCGA
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| Amino Acid Sequence |
>DNA gyrase subunit B
MSEENTYDSTSIKVLKGLDAVRKRPGMYIGDTDDGSGLHHMVFEVVDNSIDEALAGHCDDISIIIHPDESITVRDNGRGIPVDVHKEEGVSAAEVIMTVL HAGGKFDDNSYKVSGGLHGVGVSVVNALSEELILTVRRSGKIWEQTYVHGVPKEPMKIVGDSETTGTQIHFKPSAETFKNIHFSWDILAKRIRELSFLNS GVGIVLKDERSGKEELFKYEGGLRAFVEYLNTNKTAVNQVFHFNIQREDGIGVEIALQWNDSFNENLLCFTNNIPQRDGGTHLVGFRSALTRNLNTYIEA EGLAKKHKVATTGDDAREGLTAIISVKVPDPKFSSQTKDKLVSSEVKTAVEQEMGKYFSDFLLENPNEAKLVVGKMIDAARAREAARKAREMTRRKGALD IAGLPGKLADCQEKDPALSELYLVEGDSAGGSAKQGRNRRTQAILPLKGKILNVEKARFDKMISSQEVGTLITALGCGIGRDEYNIDKLRYHNIIIMTDA DVDGSHIRTLLLTFFFRQLPELIERGYIYIAQPPLYKVKKGKQEQYIKDDDAMEEYMTQSALEDASLHLNDEAPGISGESLERLVNDFRMVMKTLKRLSR LYPQELTEHFIYLPAVSLEQLGDHAAMQDWLAQYEVRLRTVEKSGLVYKASLREDRERNVWLPEVELISHGLSNYVTFNRDFFGSNDYKTVVTLGAQLST LLDDGAYIQRGERKKQVKEFKEALDWLMAESTKRHTIQRYKGLGEMNPDQLWETTMDPAQRRMLRVTIEDAIGADQIFNTLMGDAVEPRRDFIESNALAV SNLDF
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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