Pseudomonas fluorescens PICF7, PFLUOLIPICF7_RS07255
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas fluorescens PICF7, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
CGAAAGACGCTGCCGTCGCCAAGGAAGAAACCTTTGGTCCGCTGGCACCGCTGTTCCGCTTCAAGGACGAAGCCGAAGTGATCGCGATGTCCAACGACAC CGAGTTCGGCCTGGCCTCTTATTTCTATGCCCGCGACCTGGGCCGTGTGTTCCGTGTGGCTGAAGCCCTGGAATACGGCATGGTCGGCGTCAACACCGGG TTGATCTCCAACGAAGTGGCGCCGTTCGGCGGTATCAAGGCTTCGGGCCTGGGCCGTGAAGGCTCCAAATACGGGATCGAGGATTACCTGGAAATCAAAT ACCTCTGCCTGGGCATCTGACCAGCACGAGTTTGCCGCAAACGCAGAGGGCACGAGAGCGCTGTCCCTTTGCGTGTTTCACCGCGTAATTCGTAGTGGCC GGGAAAGCTGTGGCAGTCGATCATCGCATGCTGCCGTAGTTGCCTCCCCGCCACGTATTCCTTGGACCACGCCACCCGATGAGTGGCGAATGAGGACTTT
|
|
| DNA Sequence for Gene |
>PFLUOLIPICF7_RS07255
ATGAGCAAGACCAACGCATCCCTGATGAAGCGCCGCGAAGCCGCTGTACCACGCGGTGTTGGCCAGATTCACCCGATCTTCGCCGAATCCGCGAAGAACG CCACCGTGACCGACGTTGAAGGTCGCGAGTTCATCGACTTCGCCGGCGGTATTGCCGTGCTGAACACCGGCCACGTGCACCCGAAAATCATCGCGGCCGT GACCGAGCAACTGAACAAGCTGACTCACACCTGCTTCCAGGTTCTGGCCTACGAGCCTTACGTGGAGCTGTGCGAGAAAATCAACGCCAAGGTCCCCGGT GATTTCGCCAAGAAAACCCTGCTGGTCACCACCGGTTCCGAAGCTGTCGAAAACGCCGTGAAAATCGCCCGTGCTGCCACCGGCCGTGCTGGCGTGATCG CCTTCACCGGGGCCTACCACGGCCGCACCATGATGACCCTGGGCCTCACCGGTAAAGTCGTGCCTTACTCGGCAGGCATGGGCCTGATGCCAGGTGGCGT GTTCCGCGCGCTGTTCCCGAACGAACTGCACGGTGTGAGCGACGACGACGCCATCGCCAGCATCGAACGCATCTTCAAGAACGATGCCGAGCCGCGTGAC ATCGCCGCCATCATCATCGAACCGGTGCAGGGTGAAGGCGGTTTCTACGTCGCGCCCAAATCCTTCATGAAGCGCCTGCGCGAACTGTGCGACAAGCACG GCATCCTGCTGATCGCCGACGAAGTGCAAACCGGTGCCGGCCGTACCGGCACCTTCTTCGCCATGGAGCAGATGGGCGTTGCTGCCGACCTGACCACCTT CGCCAAATCCATCGCTGGCGGTTTCCCGCTGGCCGGTGTGTGCGGCAAGGCCGAGTACATGGACGCCATCGCGCCAGGCGGCCTGGGCGGCACCTACGCG GGTAGCCCGATCGCCTGCGCTGCGGCCCTGGCCGTGATGGAAGTGTTCGAAGAAGAGCACCTGCTGGACCGCTGCAAGGCTGTCGGCGAGCGTCTGGTGA CCGGTCTGAAAGCGATCCAGGCCAAGTACCCGGTGATCGGCGAAGTGCGCGCTCTGGGCGCAATGATCGCGGTTGAGCTGTTTGACGACGGCGACACCCA TAAGCCAAACGCCGCTGCCGTTGCCTCCGTGGTGGCCAAGGCGCGTGAAAAGGGCCTGATCCTGTTGAGCTGCGGCACCTACGGCAACGTGTTGCGCGTA CTGGTCCCGCTGACCTCGCCGGACGAGCAGTTGGACAAAGGCCTGGCGATCATCGAAGAGTGCTTCTCCGAGCTGTAA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
GCGGAAATTGACCTGATCGACAGAAAAAACCCGCTTCGGCGGGTTTTTTTATGCCCATTGCCGCACATTCAGGCCGTGTTCATTGTACCTGGGCGTCTGC ATTGTCTAAGGTTGCAGCATTGCCGATGGAGCGTGCTGGATGACTGCTGTTGATTTACCCGCTGTACCCCGCGTGTTGATTGCCGAGGCGGACCCCTGGT CGCGGGACCTGCTCAAGCAGGTGTTGTTGAATGTGCGCTGCGACGCGCGGCTGGATGTGTGTGCCGATGGGCAGCACGCGGTGACGTTGCTGCGAGAAAA AAACTACGATCTGATCCTGGCCGATTGGGAGCTTCCGGGCGTCGATGGTCTGAGCCTGCTGCGCAACGTGCGCCAGCAGCGCCGCTCGCCGGCGTTGCCG TTCATTCTGCTGAGCAGCCGCAATGACAGCGCCAGCGTGCGCGAAGCCTTGCCCCTGGCGCCTACGGCGTACCTGACCAAACCGCTGAACATGGAAGGCC
|
|
| Amino Acid Sequence |
>4-aminobutyrate aminotransferase
MSKTNASLMKRREAAVPRGVGQIHPIFAESAKNATVTDVEGREFIDFAGGIAVLNTGHVHPKIIAAVTEQLNKLTHTCFQVLAYEPYVELCEKINAKVPG DFAKKTLLVTTGSEAVENAVKIARAATGRAGVIAFTGAYHGRTMMTLGLTGKVVPYSAGMGLMPGGVFRALFPNELHGVSDDDAIASIERIFKNDAEPRD IAAIIIEPVQGEGGFYVAPKSFMKRLRELCDKHGILLIADEVQTGAGRTGTFFAMEQMGVAADLTTFAKSIAGGFPLAGVCGKAEYMDAIAPGGLGGTYA GSPIACAAALAVMEVFEEEHLLDRCKAVGERLVTGLKAIQAKYPVIGEVRALGAMIAVELFDDGDTHKPNAAAVASVVAKAREKGLILLSCGTYGNVLRV LVPLTSPDEQLDKGLAIIEECFSEL
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|