Strain | Pseudomonas fluorescens PICF7, complete genome. [Details] | |
DNA Sequence Upstream of Gene |
TACAACCCCAACATCAAATTCCTGTTCATCTACATCGTGCTTTTCCTGGTGGTGCTGGCCGTGCTGTACATCAAGCATCGCCTGACCCGCATGCCGGTCG GCCGCGCCTGGGAAGCCTTGCGCGAAGATGAAATCGCCTGCCGTTCCATGGGCCTGAACCACGTATTGGTCAAGCTTTCGGCGTTCACCATCGGTGCCTC CACCGCCGGTCTGGCCGGGGTGTTTTTTGCCAGCTACCAGGGCTTCGTCAACCCGTCGTCGTTCACCTTCTTCGAGTCGGCGCTGATCCTCGCCATCGTG GTACTGGGCGGCATGGGCTCGACGGTCGGCGTGGTGATCGCGGCGTTTGTATTGACCGTCGCACCGGAACTGCTGCGCAGCTTCTCCGAATACCGCGTGC TGCTGTTTGGCGTGTTGATGGTGGTGATGATGATCTGGCGACCGCGCGGCTTGATTCGGATCAGCCGTACCGGTGTGACCCCACGTAAAGGAGTGGCGCC
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DNA Sequence for Gene |
>PFLUOLIPICF7_RS05545
ATGAGCAAGGAAGTCGTGCTCTCCGTGGAACATTTGATGATGCACTTCGGTGGCATCAAGGCCTTGAGCGATGTGAGTCTCAAGGTCGAACGCAACTCGA TCTTCGCCCTGATCGGCCCCAACGGCGCCGGCAAGACCACGGTGTTCAACTGCCTCACCGGCTTCTACAAAGCCAGCGGCGGCAAGATCGAACTGAACAT TCGCGGCAAGCGGACCAACGTGATCCAGTTGCTCGGTGAACGTTTCCAGCCCACCGACTTTGTGTCGCCCAAACGCTTCTTCAGCCGGGTGTTCTACAAG ATGTTCGGCGGCACCCACTGGGTGAACCGCGCCGGGTTGGCGCGGACGTTCCAGAACATTCGCCTGTTCAAGGAAATGTCAGTGGTGGAAAACCTGCTGG TGGCCCAGCACATGTGGGTCAACCGCAACATGCTCGCGGGTATCCTCAACACCAAGGGCTACCGCAAGGCCGAAAGCGATGCCCTCGATCACGCCTTCTA CTGGCTGGAAGTGGTGGACCTGGTGGACTGCGCCAACCGCCTGGCCGGTGAGCTCTCCTACGGCCAGCAGCGCCGCCTGGAGATCGCCCGCGCCATGTGC ACCCGGCCGCAGATCATCTGCCTGGACGAACCTGCTGCGGGCCTCAACCCTCAGGAAACCGAAGCCCTCAGCGCGATGATTCGCCTGCTGCGCGACGAAC ACGACCTGACGGTGGTGCTGATCGAACACGACATGGGCATGGTGATGAGCATTTCCGACCACATCGTGGTACTGGACCACGGCAACGTGATCGCCGAGGG CGGGCCGGACGCGATCCGCAACGACCCGAAAGTGATTGCCGCCTATCTGGGCGCCGACGAAGAGGAGCTGGTATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GTGCACCTATCCTCGAAATGAAGGACCTGGACGTGTACTACGGCCCGATCCAGGCCCTGAAAAAAGTCTCGCTGCATATCAACGAAGGCGAAACCGTCAG CCTGATCGGCTCCAACGGCGCGGGCAAATCCACGCTGCTGATGTCGATCTTCGGCCAGCCACGGGCCGAGTCGGGCCAGATTCTCTACAACGGTGTCGAC ATTACCCACAAATCGTCGCACTACATCGCTTCCAACGGTATTGCGCAGTCACCGGAAGGGCGGCGGGTATTCCCCGACATGACCGTCGAGGAAAACCTGT TGATGGGCACCATCCCCATTGGCGACAAGTTTGCCCAGGAAGACATGCAACGCATGTTCGAGCTGTTCCCACGGCTCAAGGAACGACGTAATCAACGCGC CATGACCATGTCCGGCGGCGAGCAGCAAATGCTCGCCATCGCCCGCGCGCTGATGAGCCGGCCCAAGCTGTTGCTGCTCGACGAACCGAGCCTGGGCCTG
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Amino Acid Sequence |
>amino acid ABC transporter ATP-binding protein
MSKEVVLSVEHLMMHFGGIKALSDVSLKVERNSIFALIGPNGAGKTTVFNCLTGFYKASGGKIELNIRGKRTNVIQLLGERFQPTDFVSPKRFFSRVFYK MFGGTHWVNRAGLARTFQNIRLFKEMSVVENLLVAQHMWVNRNMLAGILNTKGYRKAESDALDHAFYWLEVVDLVDCANRLAGELSYGQQRRLEIARAMC TRPQIICLDEPAAGLNPQETEALSAMIRLLRDEHDLTVVLIEHDMGMVMSISDHIVVLDHGNVIAEGGPDAIRNDPKVIAAYLGADEEELV
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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