Pseudomonas fluorescens PICF7, PFLUOLIPICF7_RS03515
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas fluorescens PICF7, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
GACAGGACCATCAGGTAGCAATCGGCGTGACCAACCCCGGTGACGCGATTGCCAGCGAACACTTGCCGCGCCTGTTCGAACGCTTCTATCGAGTGGATGC ATCGCGCAGCAACAGCGGGGCCAATCACGGCCTGGGCCTGGCCATCGTCAAGGCGATTGCCCTGATGCACGGCGGCGATGTGTTCGTACGCAGCGACGGC GGTGGGAATACGTTTGGCATTACCCTGCCGGTCTAACGCCTGACTGTTGCGATTTGGGCAACAGTCATTATCTTGTTACACTCTGTATCGCACCGCTCGC CTGCGTTAATTTGACGCATCGATGAGCGCGACGGCAAAGGCAGTCTCCGCTTACCCGAATTTCCCTCGACTTTTTTCCAGGGCTCTACACTGGGAATCTG TCTTAAAGCCGCTGACTTCAGCGGCTTTTTTTTGCCGTAAAAAAGGCCAGGCACCCCCAACGACACTGGCCGTTTTCGATTGACCAAAGGAGCTCCACCG
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| DNA Sequence for Gene |
>PFLUOLIPICF7_RS03515
GTGAAGAACTCGCTGACGTTCACCCCGTTATTCCTCGCGATTGCAGCAACGATTGCCCCCCTTGCCCACGCGGCAGACTCCACCCCCGCCGACGGTTTCG TCGAAGGTGCCCACCTCAATATCAACACCCGCAACTACTACATGAACCGCGACCGTCGCGATATTCACACCGATGACAGCAAGGAATGGGGCCAGGGGTT TCTCGGCATCTTCGAGTCCGGCTACACCCAGGGCACGGTCGGTTTCGGCCTGGACGCCCACGCCATGCTCGGCCTCAAACTGGACGGCGGTGGCGGCACC GATGGCTCCAGCATCCTTCCGTACGGCAGCGGCAACGGCAAGGCGCCCGGCTCGTTCTCGACGGCCGGTGGCACCTTGAAAATGCGCGCATTCGATACCG AGCTGAAAGCCGGCGACCTGTTCCTCAATAACCCGGTGATTGCCGGCGGCGCGACCCGCATGTTGCCGCAGACTTTCCGTGGCGTGAGCCTGACCAACCA CAGCCTCGACGGTTGGATGTTCGAAGGTGGCCAGGCCAGCTTCACCAAGCTCTATAACCAGAGCGGCCACCGTCGCATCGGCACCAGCTACGGCGCGCTG CCCGAGCACACGGACAGCCAGCACATGAACTGGGCCGGCGTGTCGTTCAGCGGTATCGACGGGCTGACCAGCAACCTCTACGCCGCCGAACTCAAGGACG TGTGGAATCAGTACTACTACGACCTGGACTACACCTATGTGGTGAACGAGATGATCAGTCTCAACCCCGGTCTGCATTACTACCACACCCAGGACACCGG GCAGTCGCTGCTGGGGGATATCGACAACAACACCTACAGCCTGCACTTCACCGTGGACGTCGGCCATCACAGCGTCACTGCCGCGTACCAGAGGGTCAAC GGCAACACGCCGTTCGACTACATCGCCCAGGGCGACAGCGTGTACCTGGACAACTCACAGCAATACTCCGACTTCAACGGCCCCAATGAGCGTTCCTGGA AACTCAAGTACGCCTATAACTTCGGTGGACTGGGCCTGCCCGGCTTGACCTCGGCGGTGTCCTACATCAGCGGCAAGACCGACCTGACCAAGGTCGACCC GCAAAGCCGGGGCTATAGCGCCTGGTACAGCGCTGACGGCAAAGACGCCAAACACTGGGAACGGGATATCGACCTCAAGTACGTGGTACAGGGTGGCAAA GCCAAAGACCTGGCCGTGCGCCTGCAGTGGGCGACCAATCGCGGCAGCAACGGCTACTCGGCGGTGGATCGAGACGTGGATGAATACCGAGTGATCGTCG ATTACCCGATCAACGTGTTCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CACCCAGATCTTTCTTTTTTATCGGGTATTTAATTTTCATCGGGTAGATCTAAACTGCCAGTATTGTCCCGCTGAAGTCTGCCCGATGAGTCCTCCCCGC GTTCGAAGCTTACCGGCACGCCCAGAGCTATTTCTGATTCTGGGCAGTGGCCTTACTGTCGTCCTGATCGTGGTCATCGTCGCGGTGTTGCTGATCCGCG AACACGCGAGCACCCTGCAGGCCGCGACGCGCTCAACCACCAATATTGCGCAGTTGATCAATGCCGACGTGCTGCGTAACGTCGAACTCTACGACCTGGC CCTCAAAGGGTTGATTGCTGCCAGGCAACGTGAGGACCTGGCCCAGGTTTCCGCGAATATCCAGCATTTGGTGCAGTTTGACCTGTCCACCGCTGCGCCT TTCAAAGGTGAAGTGCTGTTGTTGGATGCCAATGGCACAGTGATCGCCGATTCTTCCACCCTGCAGCCCACCCCACGCAATTTTGCCAACCGCGATTACT
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| Amino Acid Sequence |
>porin
MKNSLTFTPLFLAIAATIAPLAHAADSTPADGFVEGAHLNINTRNYYMNRDRRDIHTDDSKEWGQGFLGIFESGYTQGTVGFGLDAHAMLGLKLDGGGGT DGSSILPYGSGNGKAPGSFSTAGGTLKMRAFDTELKAGDLFLNNPVIAGGATRMLPQTFRGVSLTNHSLDGWMFEGGQASFTKLYNQSGHRRIGTSYGAL PEHTDSQHMNWAGVSFSGIDGLTSNLYAAELKDVWNQYYYDLDYTYVVNEMISLNPGLHYYHTQDTGQSLLGDIDNNTYSLHFTVDVGHHSVTAAYQRVN GNTPFDYIAQGDSVYLDNSQQYSDFNGPNERSWKLKYAYNFGGLGLPGLTSAVSYISGKTDLTKVDPQSRGYSAWYSADGKDAKHWERDIDLKYVVQGGK AKDLAVRLQWATNRGSNGYSAVDRDVDEYRVIVDYPINVF
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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