Pseudomonas fluorescens PICF7, PFLUOLIPICF7_RS02295

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas fluorescens PICF7, complete genome. [Details]
DNA Sequence Upstream of Gene
GTGTCGCAGGTTTCGTCGAACGCGCCGTGGCGCAGTCGCACATTCGCCTGGTCACCGGCGGCAAGGCGGTGGAAGGCAATGGCTTCTTCTTTGAACCGAC CGTGCTGGCCGACGCGCAGCAGGACGATGAGATCGTGCGCCGCGAAGTGTTCGGGCCGGTGGTATCGGTGACCCGGTTCACTGATGAAGCGCAGGTGCTC GGTTGGGCCAACGATTCGGACTACGGCCTGGCGTCGTCCGTGTGGACCGCCGATGTAGGACGCGCCCACCGCTTGGCCGCACGCCTGCAGTACGGCTGCA CGTGGGTGAATACCCACTTCATGCTCGTCAGCGAAATGCCCCACGGCGGTCAGAAACTGTCCGGGTATGGCAAGGACATGTCCATGTATGGGTTGGAGGA CTACACCAGCGTGCGCCATGTGATGTTCAAGCACTGACGATTTAACCCGGCATCCGTTCTGGATGCCGGGAACCTATAACAATAATTTTCAGGATCTCCC
DNA Sequence for Gene
>PFLUOLIPICF7_RS02295
ATGGATATCACCCGCCGCGACTTCCTCAACGGCGTCGCCATCACGATTGCCGCTGGCATGACCCCGCTGCAAATCCTGCAAGCCGCCCCCGATGGCCGTT ACTACCCACCTGCCCTCACCGGCCTGCGCGGCAGCCATGCCGGCTCGTTCGAAGTGGCGCACCAAATGGGCTGGGAAAAGAAGGTGTTCGACACCGACAA ACTGCCGATCACCGAGGATTACGACCTGGTGGTGGTCGGTGGTGGCTTGAGTGGTTTGTCGGCGGCGTGGTTCTACCGCGAAAAACACCCCAAGGCGAAG ATCCTGATCCTGGAAAACCACGACGACTTCGGCGGCCACGCCAAGCGCAACGAATTCCAGGCCGGTGGCCGCATGATCATCGGCTACGGCGGGAGCGAGG CTTTCCAGTCGCCCAACCACCTGTACAGCAAGGAAGTGAACGGGCTGTTGAAAACGCTCGGGGTGAATATAAAGCGCTTTGAAACCGCCTTCGATCGCCA GTTCTACCCAGGCCTGGGGCTCTCGCGCGGGGTGTTCTTCGACAAGGAAAACTTCGGCGAAGACAAACTGGTGACCGGCGACCCGACCCCGATGGTGGCT GACGATGTTGCACCAGGCCAGCTGAATGCCCGCGCCATCCGCGATTTCATCAATGACTTCCCATTGCCAGCGGCAGACCGCCAGGCCCTGATCGAGCTGC ACATGGCGCCCAAGGATTACCTGCCGGGCAAGACTGCCGAAGAAAAGGCCGACTACTTGGCAGCAACCAGCTACCGCGACTTTCTGCTCAAGAACGTAGG ATTATCGGAAGGCGCGGTGAAGTATTTCCAGAGCCGCACCAATGACTTCATGGCGTTGAGCATTGATGCCGTCGCTTCGGCTGACGCCTACAGCGTGGGT TTCCCAGGCTTTGCCGGGATGAACCTGGCGCCCATCAGCGAAGAAGCGGCAGCGGAAATGGAAGAGCCCTACATCTACCACTTCCCCGATGGAAATGCCT CGGTGGCGCGCTTGCTGGTGCGCAGCCTGATCCCGGGCGTGGCGCCAGGGCATACCATGGACGATATCGTGCTGGCGACGTTCGACTACGCCAAGCTCGA CCAGCCCAAGGCAGCCGTGCGATTGCGCTTGAACAGCACGGCGGTCAGCGTGCGTAACGTCGACAACGGCGTGCATATCGGCTACAGCCGTGGCGGACAA CTCGCACAGGTGCGCGGCAAACGCTGCATCCTGGCCTGCTACAACATGATGATCCCGTACCTGTTGAAGGATCTGCCGGCGCCGCAGGCCCATGCCCTGA GCCAGAACGTAAAATACCCGCTGGTGTACACCAAGGTGGTGATCCGTAATTGGCAGTCGTTCCAGACACTGGGCGTGCATGAGATCTACGCGGCGACCCA GCCTTACAGCCGCATCAAGTTGGACTACCCGGTGAGCATGGGAGGCTACGACCACCCGCGCGACCCGACACAGCCGATCGGCTTGCACATGGTCTACGTG CCCACCAGCCCCAACAGCGGCATGAACGCCCGCGACCAGGCCCGTGCCGGGCGGGGCAAACTGTATGGGCAGACGTTCGAGCAGTTGGAAGCGCAGTTGC GTGATCAGTTGCAACGTATGCTCGGGCCGGGTGGGTTCAACCATGAGACCGACATCCTGGCGATCACTGTCAACCGCTGGTCACACGGTTATGCGACCTT CTCCAACAGCTTGTTCGATGATGCCGATGAAAGCGAAGCGTTGATGAAGCTGGCGAAAAAGCCGGTGGGGCATGTGAGTATCGCTAACTCGGATGCGGCG TGGAGTGCGTATGCCCATGCGGCGATTGATGAGGCGTACAGGGCAGCGGGCGAAGTGGCCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
ACGTGACCTGACGCCTGAACCTAATGGGGGAGCGGGCTTGCCTGCGATGCGGTCGACTCGGCCTCCAGTCTGACCGAGCTGATGCCATCGCAGGCAAGCC CGCTCCTACATGGGGTCGTCTTCTTTCCTGAGGAGTGTGTTCGCTCGCCCCCCCTGCAACACCTTGTTTCACTTGCAACGCCATCACCCCGCCATCAATC AATTTTCCTACGTCATCGAACCGCTTAAGCTATCCAGCGTCTGTTTAATGTCCGTTGCGTTTGGTCGAAGGCATGTCCGAACCGTAATTTCTGATCCAGC ACGTGCCAGGAACGGCGCGGGATTTGCTCACGACAGGTTGTCTCTATGCACCGCAGGAATTTGCTCAAAGCGTCCATGGCCATTGCGGCTTACACCGGTT TGTCGGCCAGCGGCCTGCTCGCCGCCCAGGCCTGGGCGGGGAACCGTGCTGCCGATGGCAAGGCCGTGGCGTTCGACTTCGAATCGCTCAAGGCCCAGGC
Amino Acid Sequence
>spermidine dehydrogenase
MDITRRDFLNGVAITIAAGMTPLQILQAAPDGRYYPPALTGLRGSHAGSFEVAHQMGWEKKVFDTDKLPITEDYDLVVVGGGLSGLSAAWFYREKHPKAK ILILENHDDFGGHAKRNEFQAGGRMIIGYGGSEAFQSPNHLYSKEVNGLLKTLGVNIKRFETAFDRQFYPGLGLSRGVFFDKENFGEDKLVTGDPTPMVA DDVAPGQLNARAIRDFINDFPLPAADRQALIELHMAPKDYLPGKTAEEKADYLAATSYRDFLLKNVGLSEGAVKYFQSRTNDFMALSIDAVASADAYSVG FPGFAGMNLAPISEEAAAEMEEPYIYHFPDGNASVARLLVRSLIPGVAPGHTMDDIVLATFDYAKLDQPKAAVRLRLNSTAVSVRNVDNGVHIGYSRGGQ LAQVRGKRCILACYNMMIPYLLKDLPAPQAHALSQNVKYPLVYTKVVIRNWQSFQTLGVHEIYAATQPYSRIKLDYPVSMGGYDHPRDPTQPIGLHMVYV PTSPNSGMNARDQARAGRGKLYGQTFEQLEAQLRDQLQRMLGPGGFNHETDILAITVNRWSHGYATFSNSLFDDADESEALMKLAKKPVGHVSIANSDAA WSAYAHAAIDEAYRAAGEVA
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site