Pseudomonas fluorescens PICF7, PFLUOLIPICF7_RS00250
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas fluorescens PICF7, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
CAGAAGAACATCGGTCCGAGCGGCATCCTGGTCAACATCATCCGTGAGGACCTGTTGGGTCGCGCCCGTTCGCTGTGCCCGACCATGCTCAACTACAAGG TCGCGGCCGATAACGGCTCGATGTACAACACTCCGCCAGCGTTTGCCTGGTACCTCTCCGGCCTGGTGTTCGAATGGCTGAAAGAGCAGGGCGGTGTCGC CGCCATGGGCAAGCTCAACGAAGAGAAGAAGCGCGTCCTGTACGACTTCATCGACGCCAGCGGCCTGTACAGCAACCCGATCAACCTGACTGATCGCTCG TGGATGAACGTGCCGTTCCGCCTGGCTGATGATCGCCTGGACAAGCCGTTCCTGGTCGGTGCCGAAGAGCGTGGCCTGCTGAACCTCAAGGGGCACCGTT CGGTCGGTGGCATGCGCGCCTCCATCTACAATGCCGTCGACATCCACGCGATCAACGCGCTGGTTGACTACATGGCAGCGTTCGAAAAGGAACACGGCTA
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| DNA Sequence for Gene |
>PFLUOLIPICF7_RS00250
ATGTCTGAGCAAGAACTCAAGGCCCTGCGCGTGCGCATTGACAGCCTGGACGAGAAAGTCCTGGAGCTGATCAGTGAGCGCGCGCGGTGCGCCCAGGAAG TGGCACGGGTGAAGATGGCCTCCCTGGCCGAAGGCGAAGTGCCGGTGTTCTACCGTCCCGAGCGTGAAGCCCAGGTGCTCAAGCGTGTCATGGAGCGTAA TAAGGGCCCACTGGGCAACGAAGAGATGGCGCGGTTGTTCCGCGAAATCATGTCTTCGTGCCTGGCGCTGGAACAACCGCTGAAAGTGGCTTATCTGGGT CCCGAGGGCACTTTCACCCAAGCGGCTGCCATGAAGCACTTCGGTCACGCGGTGATCAGCAAGCCAATGGCGGCGATCGATGAAGTGTTCCGTGAAGTGG CGGCCGGCGCGGTGAATTTTGGCGTGGTGCCGGTGGAAAACTCCACCGAAGGCGCGGTCAACCACACGCTGGACAGCTTCCTCGAACACGACATGGTCAT CTGCGGCGAAGTCGAGCTGCGCATCCACCATCACCTGCTGGTGGGCGAGAATACCAAGACCGACAGTATCAGCCGCATCTACTCCCACGCCCAGTCCCTG GCCCAGTGCCGCAAGTGGCTGGACGCGCATTATCCGAATGTCGAGCGGGTAGCTGTCTCCAGCAACGCCGAGGCCGCCAAGCGGGTCAAGGGTGAGTGGA ATTCGGCGGCCATCGCCGGTGATATGGCCGCTGGGCTGTACGGCCTGACGCGCCTGGCCGAGAAAATCGAGGACCGCCCGGACAACTCCACGCGCTTCCT GATGATCGGCAGCCAGGAAGTGCCGCCCACTGGCGACGACAAGACCTCGATCATTGTCTCCATGAGCAACAAGCCTGGCGCGCTGCATGAGCTGCTGGTG CCGTTCCATGATAACGGGATTGACCTGACGCGCATCGAGACTCGTCCTTCGCGCAGCGGTAAATGGACTTACGTGTTCTTTATCGACTTCATCGGCCATC ACCGCGACCCGCTGGTCAAGGGTGTGCTGGAGAAAATCAGTCAGGAAGCCGTGGCACTCAAGGTGCTGGGCTCTTACCCGAAAGCGGTTTTGTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GGCTTTAACATGAGTGGCAACTTCCTCACCCTGGCTCAGCCGGGCGTGCAACAACTGTCGCCTTACGTTCCGGGCAAGCCTGTGGATGAGCTGGCGCGTG AGTTGAACCTGGATCCGGCGAACATCGTCAAGCTGGCCAGTAACGAAAACCCGCTGGGCCCGAGCCCGAAGGTGTTGGCGGCGATTCGTGAAGAGTTGGC TGAGCTGACCCGCTATCCCGATGGTAACGGCTTTGCCTTGAAGTCTCTGCTGGCACAAAAGTGCGGTGTCGAGCTGAACCAGGTCACCCTGGGCAATGGC TCCAACGACATTCTTGAGCTGGTTGGTCGTGCGTATCTGGCGCCAGGTTTGAATGCGGTGTTCAGCGAGCATGCGTTTGCGGTCTATCCGATCGTGACCC AGGCGGTGGGCGCTGATGCGAAAGTGGTCCCCGCGAAAGAGTGGGGTCATGACCTGCCGGCCATGCTGGCGGCCATTGATGCCCAGACCCGCGTCGTGTT
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| Amino Acid Sequence |
>prephenate dehydratase
MSEQELKALRVRIDSLDEKVLELISERARCAQEVARVKMASLAEGEVPVFYRPEREAQVLKRVMERNKGPLGNEEMARLFREIMSSCLALEQPLKVAYLG PEGTFTQAAAMKHFGHAVISKPMAAIDEVFREVAAGAVNFGVVPVENSTEGAVNHTLDSFLEHDMVICGEVELRIHHHLLVGENTKTDSISRIYSHAQSL AQCRKWLDAHYPNVERVAVSSNAEAAKRVKGEWNSAAIAGDMAAGLYGLTRLAEKIEDRPDNSTRFLMIGSQEVPPTGDDKTSIIVSMSNKPGALHELLV PFHDNGIDLTRIETRPSRSGKWTYVFFIDFIGHHRDPLVKGVLEKISQEAVALKVLGSYPKAVL
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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