Strain | Pseudomonas fluorescens strain PCL1751, complete genome. [Details] | |
DNA Sequence Upstream of Gene |
GACGGTCTTGGCGCTCACCAGGGTGCAGTCATCGCCGACCTGTATCTGGAGTGGCGCCGATGGCGTCAGGTCAGATTGCACGACTGGTTGATTGCCTTTG TTCCAGATCAACATGCCGATCACGTACACGCCTCTGTGCTGATTGCCTTCTTCATCACATATGCGAAACGGCAGTTCTTTCGGTATCTCAGCCACGATGC CCCTGAGCAACAGGCGCGCCTCCAGGCGTTTATGGGGGAGGTTGGGCTTTCGGCCGAACAGCGTGGTGATCAATCGAACAAGTGCAGTAACCGGGGAGAG AAATTCTCCGAGTGTCATATAGGCCTCCCATCCCTAGGCAAAAAACGAGGTATGTCATCTTCAACGTGTCGTGACTATAAACGCTTTGTACCGGGGAGGC TGTTTTCGGCAAAGCGGACCAGGCGTGCAGCACTCGGTATTTGTCCTCGAGGCTCACACGATTTAGGCTGGCGCCAACGTCAACAAGATGGAAAGCCGCG
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DNA Sequence for Gene |
>PF1751_RS24810
ATGACCTGGTCTGCCAAGCAATACACACTGTTCGAACAGCAGCGCACCCGTCCCGTCCGTGACTTGGTCGCGGCCATTCCGAATGCCGAGGTGCGCAACG CCGTGGATCTGGGCTGCGGCCCCGGTAACTCCACCGAAGTGCTGGCCGAGCGTTTTCCGCAAGCCCATGTCACCGGCCTGGACAGCTCCGACGAAATGCT GGTGGACGCCCGCAAACGGCTGCCGGCACTGAGCTTCGAACTGGCGGATATAGGTGACTGGAAACCTGTGCAAGCCTTCGATGTGATCCTGGCCAACGCG TCCCTGCAATGGTTACCGGACCACGCCATGCTTTACCCGCACCTGGCCCGCCAACTGACGCCCGGTGGCACGCTGGCGGTGCAAACCCCGGACAACCTCG ATGAGCCTGCCCACCGGCTTGCCCGCGACGTCGCGGCCGATGGTCCTTGGTCGGCCAAGATCGGCGCGGTCAAACACAACCAGCGTCATACCGCGAGCTA CTACTACGAACTGCTGAGCAAGCATTGCAGTACCGTCGATGTGTGGCGCACCACGTATCAGCACCCGTTGGCCGACCACGCGGCGGTGGTGGAGTGGTTC AAAGCATCGGCGCTCAGACCGTTCCTTGCGCCTTTGACCGACGGCGAGAAAGCCGCCTTCCTGCAGGAATATCAGGCGCGGATTACCCAGGCCTATCCAG CCCTGGCGGATGGCACCGTGTTGCTGCCGTTTCCGCGCCTGTTCATCATCGCGACCCGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
CGCTAAGACGACAAGTGGCGGTCAAGCCGCCGCCGCTTGCGCTTTCAAGTACTCATCTGCCGACACCACACCCGCATAACCAAAGGCCAGCGACGCCATG TACGCCCCATGCACCTGCGCCGCCGGAATCACCTGGCCATTGAACTCCAGGTCCCGTGTCGCGCACGCGTCATGAATCACCGTGACCTTGTAGCCCAGGT CCGCCGCCGCCCGTACCACGCCGTCGATGCACATGTGGCTCATGCTGCCAACCACCACCAGGTCTGTGATGGTGCGTTGTTCCAGCAGTGCGCGCAGGTT GGTTTCGCGAAACGCATTCACAAAGTGTTTAAGCACCACCGGCTCACTGCCTTCGTTCAGCACCTTGGAATGCAGATGCGCCCCTTCGGAGCCTGGCGTG AAGAACGGCGCGTCATCGGACGTGAACTCATGGCGCACATGAATCACCGCATCGCCTGCCTGGCGAAACGCCTGCAGTACTTGCGCGGCCTTGTCTGCCG
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Amino Acid Sequence |
>trans-aconitate methyltransferase
MTWSAKQYTLFEQQRTRPVRDLVAAIPNAEVRNAVDLGCGPGNSTEVLAERFPQAHVTGLDSSDEMLVDARKRLPALSFELADIGDWKPVQAFDVILANA SLQWLPDHAMLYPHLARQLTPGGTLAVQTPDNLDEPAHRLARDVAADGPWSAKIGAVKHNQRHTASYYYELLSKHCSTVDVWRTTYQHPLADHAAVVEWF KASALRPFLAPLTDGEKAAFLQEYQARITQAYPALADGTVLLPFPRLFIIATR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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