Strain | Pseudomonas fluorescens strain PCL1751, complete genome. [Details] | |
DNA Sequence Upstream of Gene |
CTGCCGCTGATCCTCAAGGAGAACGGCGACAGCTTCAACATCAAGGACCTGCTGCGTCCGGCCACCTTCGTGCCCGAATCCAAGCGCCTGAATGTGTTGC TGCGCGAATTCCGCGCCAACCACAATCACATGGCAATCGTGATCGACGAATACGGCGGCGTAGCCGGCCTGGTGACGATTGAAGACGTGCTGGAACAGAT CGTCGGCGACATCGAGGACGAGCACGACGTTGAAGAAGACAGCTACATCAAGCCACTGCCCAGCGGTGACTTCCTGATCAAGGCGCTGACGCCGATCGAG AACTTCAATGAGTTCTTCGACAGCGAATTCTCCGATGACGAGTTCGATACCGTCGGCGGGTTGGTGATGAGTGCGTTCGGGCATCTGCCCAAGCGTAACG AAACCACCGAGATCGGCGCGTATCGCTTCCGCATCCTGAATGCCGATAGTCGTCGAATCCACTTGATCCGCCTGACCCCTATTGCCCGCTAAGGAATGAC
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DNA Sequence for Gene |
>PF1751_RS24355
ATGCAGCGCCTAACCCGCCCCGGCTGGCCCGGTAATCTGCTGGCCGTGGTGGCCGGTGCCATCACCACCCTGGCGTTGGCGCCGTTCGACGTGTGGCCAT TTGCGCTGCTGGCGGTCGGACTGTTCTATATCGGGCTGCGGGACCTGAGCCCGCGCCAGGCCCTGGGCCGTGGCTGGTGCTTCGGTTTCGGCTTGTTCGG CGCCGGCACCAGCTGGATCTACTACAGCATCCACCACTTCGGCGGCGCTTCGGTGCTGCTGGCGGGTTTCTTGATGCTGCTGTTTACCGCCGCCATCGCC TGGTTCTTCGCGCTGCCCGCGTGGTTGTGGGCGCGCTGGTTGCGTCGTAACGAGGCCCCATTGGCGGATGCATTGACGTTTGCTGCGTTGTGGGTGGGCC AGGAAGCGTTTCGCGGCTGGTTCCTGACGGGGTTTCCGTGGCTGTACTCCGGCTACAGCCAGCTTGACGGCCCGCTGACGGGTTTGGCGCCCGTGGGCGG TATGTGGCTGATTTCCTTTGCCCTGGCACTCACGGCGGCGCTGCTGTGCAACTTGCCGCGCCTGCTGGCTGGCAAGCGCAACGCATTCATTGGTGCAGGC CTTGTATTACTGGTCGCGCCCTGGGCGATCGGCCTGGCGCTCAAGCATCACGCCTGGACCAGCCCGTCTGGCGCGCCGCTGAGCGTGGCCGCCATCCAGG GCAACGTCGAACAAAGCATGAAGTGGGACCCGGAGCAGCTCAACGCACAGCTCGCGCTGTACCGCGACATGAGCTTCACCTCCAAGCCCGTCGACCTGCT GGTGTGGCCGGAAACCGCCGTGCCGGTGCTCAAGGAGTCTGTCGAAGGCTACCTGGGCATGATGGGCAAGTTCGCTGCCGACCGGCACACCGCGCTGATC ACCGGCGTACCGATCCGCCAGGAAGTGCATCACCAGAAGCGCTACTTCAACGGTATCACCGTGGTTGGCGAAGGCGACGGCACCTACCTCAAACAGAAGC TGGTGCCGTTTGGCGAGTACGTGCCGCTGCAGGACATGCTGCGCGGCCTGATTGCCTTCTTCGATTTGCCAATGTCCGACTTCGCTCGCGGCCCGTCAGA CCAGGCAATGCTGCAGGCCAAGGGCTATCAGATTGCGCCGTTCATTTGCTACGAAGTGGTGTACCCGGAGTTCGCTGCCGGCCTGTCGGCCCAGAGTGAT CTGCTGCTCACCATCAGCAACGATACGTGGTTCGGCCGCTCCATCGGTCCGTTGCAGCACCTGCAAATGGCGCAGATGCGTGCGCTCGAAGCCGGTCGCT GGATGATCCGCGCCACCAACAATGGCGTGACCGGCCTGATCAACCCGTTCGGTCAGATCACCGCGCAGATCCCGCAATTCGAACGCGGCATCCTCTACGG TGAAGTCGTGCCGATGCACAACCTTACGCCGTACCTGCAATGGCGCTCATGGCCGTTGATCATTGTGTGCCTGGGGCTGTTTGGCTGGGCGCTGCTGGCC GGTCGCATGGCCAAAACCGTCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
CAGACAAACGCAGACACCCAATGTGGGAGCGGGCTTGCTCGCGAATGCGGTGGATCAGTCAATACATTTGGTGACTGACACACCGCATTCGCGAGCAAGC CCGCTCCCACATTTTGATTTGCGGTGTTATTGGTAGAACACCCGATACCCCACCTGCCCCACCGCTTCATTGATCAACTGCCCGCTCTGCCACACCGACT TGAACTCCGGCATCCAACCACCCAGCGGCCGGGCGTTGTCCACGCCCAGGAAACCCACGGGCGCCGGCACCACGGTGAAACCGGCCTTTTCAAAGCTCCA GACCGAACGCGACATGTGCCAGGCCTGGGTCACCACCACCACGCGCTTGATACCCTCCGGCAATAGAATCTCGGCACTCATCTGCGCATTTTCCCAGGTC GTACGGCTGCGCTCTTCCTTCCAGCGTACGGTTACACCGAAATCATCCTGCATCGACACGGCCATCAACTCCGCCTCGCTGGGCGGTGTGCCGTAATGCA
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Amino Acid Sequence |
>apolipoprotein N-acyltransferase
MQRLTRPGWPGNLLAVVAGAITTLALAPFDVWPFALLAVGLFYIGLRDLSPRQALGRGWCFGFGLFGAGTSWIYYSIHHFGGASVLLAGFLMLLFTAAIA WFFALPAWLWARWLRRNEAPLADALTFAALWVGQEAFRGWFLTGFPWLYSGYSQLDGPLTGLAPVGGMWLISFALALTAALLCNLPRLLAGKRNAFIGAG LVLLVAPWAIGLALKHHAWTSPSGAPLSVAAIQGNVEQSMKWDPEQLNAQLALYRDMSFTSKPVDLLVWPETAVPVLKESVEGYLGMMGKFAADRHTALI TGVPIRQEVHHQKRYFNGITVVGEGDGTYLKQKLVPFGEYVPLQDMLRGLIAFFDLPMSDFARGPSDQAMLQAKGYQIAPFICYEVVYPEFAAGLSAQSD LLLTISNDTWFGRSIGPLQHLQMAQMRALEAGRWMIRATNNGVTGLINPFGQITAQIPQFERGILYGEVVPMHNLTPYLQWRSWPLIIVCLGLFGWALLA GRMAKTV
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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