Strain | Pseudomonas fluorescens strain PCL1751, complete genome. [Details] | |
DNA Sequence Upstream of Gene |
GGTTCCAAGCGCACCGGCCCGGACCTGGCCCGTGTCGGCGGGCGTTACTCCGATGACTGGCAGCGCGCGCACTTGTACAACCCGCGCAACGTGGTGCCTG AATCGAAAATGCCGGCGTACCCGTTCCTCGTGGAAAACAAGCTCGACGGCAAGGACACCGCGAAGAAGATGGAAGTCTTGCGCACCCTGGGCGTGCCCTA CACCGACGAAGACATCGCCGGTGCAGCCGCAGCCGTAAAGGGCAAGACCGAAATGGACGCACTGGTGGCCTACCTGCAAGGCCTGGGCACCATCATCAAA AGCAAACGGTGATTCTTCATGGATATCGGGATGATTCGTGGCCTGGGCACCGTTGTGGTGATGGTGGCCTTTATCGGCCTGGCGTTGTGGGTGTTCAGCC CCAAGCGCAAGTCGGAGTTTGAAGACGCGACCTTGCTGCCCTTTGCGGATGATCCCGAAGCCATCAAGCACGTCGAGCAAGCTTCTAGGAGTAACAAAGA
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DNA Sequence for Gene |
>PF1751_RS20490
ATGACTACGTTCTGGAGTCTGTACGTCACAGTCCTCAGCCTGGGTACCATCTTCGCCCTGACCTGGCTGCTGCTGTCGACCCGCAAGGGCCAGCGCGCCG AGCAAACCGACGAGACCGTCGGCCACTCGTTCGACGGCATCGAGGAGTACGACAACCCCCTGCCCAAGTGGTGGTTCATGCTGTTCGTCGGCACCATCAT CTTCGCCCTCGGCTACCTGGCGCTGTACCCCGGCCTGGGTAACTGGAAGGGCCTGCTGCCGGGCTACAGCTACCTCGACAACGACAAGCAAACCCCCTTC GCCAACGGCCAGACCGGCTGGACCGGCGTGCACGAATGGGAAAAGGAAATGGCCAAGTCGGACGCCAAGTTCGGCCCGATCTTCGCCAAATTCGCGTCGA TGCCGATTGAAGAAGTCGCCAAGGACCCACAAGCCTTGAAGATGGGCGGCCGCCTGTTCGCCTCCAACTGCTCGGTGTGCCACGGTTCCGACGCCAAGGG TGCCTATGGCTTCCCCAACCTGACCGATGCCGACTGGCGCTGGGGTGGCGAGCCGGCCACCATCAAGGAAACCATCATGAAAGGCCGCCATGCGGTGATG CCGGCCTGGCTGGATATCCTCAAGGAGCAAGGCGTCAGTGATGTGGCGGCGTTCGTCGTCACCAACCTTGACGGCCGCAAGCTGCCCGAAGGCGTGAAAG CCGATGTGGCCAACGGCGAGAAACTCTTCGCCGCCAACTGCGTGGCCTGCCACGGTCCTGCCGGCAAAGGCACCCCTGCCATGGGCGCGCCCGACCTGAC CCATCCGGGCGCGTTCATCTACGGTTCGAGCTTTGCTCAACTGCAACAGACCATCCGCTGGGGCCGCCAGGGCCAGATGCCTGCTCAGGAGCAACTGCAA GGCAACGACAAAGTGCACTTGCTGGCAGCGTATGTGTACAGCTTGTCCCATGGGGATAAGAAGGCTGAAGAGCAGTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
CCACTCGAAAAGACCAGAGCCCCGTGCAGCGCAAGCTGGCGGGGCTTTGGTCTTTCTGGCTCCCAGAAGCTGTTCAAATTGGAGCACATGACCGTTTGTA GCCTCCGACTTGCCGCCGTCGACTTCCAAGTAGTAACGTAACTACATGAAGTCTGACGGAGGGGGTCACCTCATGACCATCACAACCATTTCCAGCCGCG AATTCAACCAAGACACAAGTGGTGCCAAAAAAGCCGCCCGCCAGGGGCCGGTTTTTATCACCGATCGCGGCAAGCCTGCCCATGTACTGCTAAGTATTGA GGACTACCAGAAACTGACAGGGCTCAATGCCGATATCGTTGATCTGCTAGTGATGCCGGAAGCGGCCGATATCGACTTCGAAACCGAACGTGCCGTGATC ACTCATCGACCCGTGGACCTCTCTTGATGTATCTGCTCGACACCAACGTTATCTCCGAACTGCGTAAACCCCACGCCGATGCAAAGGTGGTCGCCTGGGC
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Amino Acid Sequence |
>cytochrome CBB3
MTTFWSLYVTVLSLGTIFALTWLLLSTRKGQRAEQTDETVGHSFDGIEEYDNPLPKWWFMLFVGTIIFALGYLALYPGLGNWKGLLPGYSYLDNDKQTPF ANGQTGWTGVHEWEKEMAKSDAKFGPIFAKFASMPIEEVAKDPQALKMGGRLFASNCSVCHGSDAKGAYGFPNLTDADWRWGGEPATIKETIMKGRHAVM PAWLDILKEQGVSDVAAFVVTNLDGRKLPEGVKADVANGEKLFAANCVACHGPAGKGTPAMGAPDLTHPGAFIYGSSFAQLQQTIRWGRQGQMPAQEQLQ GNDKVHLLAAYVYSLSHGDKKAEEQ
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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