Pseudomonas fluorescens PCL1751, PF1751_RS19530
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas fluorescens strain PCL1751, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
GCCCAGTTTGACCTGGCCGGTGGCGCCGGCCGGAATCTTCACTTCCAGGCCTTGGCGATACACTTCCTGGTCGCCGAAGAATTCATCGCTATGGGCCTCG CCTTGCGGCAACGTGGGCTGTTTGGCCAGTCCATCGAACTTCATGCGCTGCTTGTACAGGTAATAACCGTCGGCAATCTGCCAATACAGCTGGGTCTCGC CACTTTCAAGACGTTCGGAGGTAAAAGTGAAGGCTTTGCCCACCGGCAGGAAGTCGGGTTTGGTCTCAAATGGGTTGCCCGGCGCGGCCTGGGCGAACCC CGCGAACAACACCAGCAGAAAGGTAAACAAATGCCGCATGGTCAAGCCTTAGTTCGATGCAAGTAGGCACACAATGTGTGGCGTTGATTAACCGATGATT AACCGAGGCTATTCTAGATTGAGTGTGGGTGGTTTAGCGGCATAATCTGCACTTAATCCGCCGCACTTTTAATCACCCGATCTTTTATGAAGGGTTCACC
|
|
| DNA Sequence for Gene |
>PF1751_RS19530
ATGCACGTACTGGTCTGTGAAGACGACGAACTGATCGCCAGCGGCATCGTGGCCGGCCTGACCGCGCAAGGTTTTACCGTGGAGCGTGTGGCCTCGGCCG GTGCCGCGCGCGCGATGCTCAGGGCGGCCACGTTCGACATCATGGTGCTCGACCTCGGCCTGCCGGACGAAGACGGCCTCAAGCTGCTGCAGCAACAGCG CAGCCAGGGCCTGGAAATCCCGGTGCTGATCCTCACCGCGCGCGATTCGGTAACCAACCGCGTCGACGGCCTGCAAGCCGGCGCCGATGACTACCTGCTC AAACCCTTCGACCTGCGCGAACTCGCCGCGCGCCTGCAAACCCTGCTGCGCCGGGTGGCGGGGCGCAGCGTCAACCTGATCGAGCATGGCCGACTGGCCT ACGACCCCAGCAGCCGTGAGACTTTCCTGGGGGGCGAGCCGGTAGACCTGTCGCGCCGCGAACAGGCGCTGTTGCAAGCCCTGCTGCACAACAAAGGTCG GGTGCTGTCCAGCGAGCAACTCAAGGACAGCGTCTACGGCTTCAACGACGAGTTGGAAAGCAACGCCCTCAACGTGCATATCCACCACCTGCGACGCAAA TTGGGCAATGGCATTGTCGAGACCGTGCGCGGTCTCGGCTATCGTCTGGGCCCGGCGGACGGGGGCGAGGACGCATCGTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
AAAGCCTGCGCCTGCGCCTGACATTCAAGCTGGGCGCTGCTTTTGTGTTGATCTGGGCCCTGGCGGCGGCCTGGATGCTCAACGATCTGCGTAACCAGAT GATGTTCTCCCTCGATCAACGCCTGGTGGCGTCGGCGCGCATGGTGGCGGGGCTGACCGAGCAGATGCCGGGCCTGGCCAGTGTGAGCGGTGGTGCGCAT TTTCATGGGGCACAGCTGAATGTGCCGGGCGGCATGGCGTGCCAGGTCAGCTCCTTGCGCGGCGAAGTGTTGGCGCGCAGCCATGCCACGCCGGATGAAG GCCTGGAATCGCGCCAGAGTGGTTTTCGTGATCAGCTGATCGATGGTGTGAACTGGCGCAGCTTCACGCTTTCCCGTGGCGACCTGTTGATCACCACGGC CGACCGTCAAGTCGAACGTGAGGCTTTGAACCTGTCGATCCTGCTGGCCGCTTCGGTGCCAGTGGGCGTTGCCATGCTCGGCTGCCTGTGCCTGTTGTGG
|
|
| Amino Acid Sequence |
>transcriptional regulator
MHVLVCEDDELIASGIVAGLTAQGFTVERVASAGAARAMLRAATFDIMVLDLGLPDEDGLKLLQQQRSQGLEIPVLILTARDSVTNRVDGLQAGADDYLL KPFDLRELAARLQTLLRRVAGRSVNLIEHGRLAYDPSSRETFLGGEPVDLSRREQALLQALLHNKGRVLSSEQLKDSVYGFNDELESNALNVHIHHLRRK LGNGIVETVRGLGYRLGPADGGEDAS
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|