Strain | Pseudomonas fluorescens strain PCL1751, complete genome. [Details] | |
DNA Sequence Upstream of Gene |
GCGCAATTCGCGCGGTGTCCGACACGCCGATCGTGATCCTCACGGCCAAGGAAGACGACCTGGACCATATCCTTGGCCTGGAGTCCGGTGCCGACGATTA TGTCATCAAGCCGATCAAGCCCCCTGTGTTGCTGGCGCGCCTGCGTGCCTTGCAACGACGTCAGGCGCCGGAGCCGACGGTGCGCGGGGCGCTGGCCTTC GGGCGGCTGGCCATCGATCGCAGTTGCCGCGTGGTCAGCCTTGGCGATGACAAGATCGACCTCACCACCATGGAGTTTGAACTGCTGTGGCTGCTGGCCA GTAACTCGGGGACGATCCTGTCCCGCGATGACATCCTCAACCGCATGCGCGGCATTGCGTTCGACGGGCTCAACCGCAGTGTCGATGTCTACATCAGCAA ACTGCGCAGCAAACTCAACGACAACCCGCGCGAACCAGTGTGCATCAAGACCATCTGGGGCAAGGGCTACCTGTTCAACCCGTTTGCGTGGGAGGCCTAG
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DNA Sequence for Gene |
>PF1751_RS14675
ATGCTGCGGCTCTATATCCGCCTGTACATCATCCTTGCGCTAGGCCTGGCGGGCGCTATCTGGCTGGTCAACTACACGTTCGACGAGCTTCTTCCCGAGG CCAACGAAACCTATAACCGCGAGGCCATGCGCGGCCCGGCCTATGCTTTGGTCGAGCAGTTGCGACCCTTGCTCGGTGATGCCCGCCAAGCGCGTCTGGG CGAGTTGCAACCCCATTACGGTCTGCACCTGAAACTGGTCCAGCGCGATGACCTGGCGCTGAACCCGCGTGAGCAACAGTTGCTGGCGGCTGGGCAGTTG GTGGTGCGTGGCGATTTCATGGAGTTCATCGCCAATCTCGACGGCGGCCCGCAATTGCTCAATATCAAGCTGCCCGACGAGCCTAAATGGCTGTACTTGT GGGCCTACAGCCTGTTGGGGCTGAGCCTGGCGATCGTGCTGTATTTCTGGGTTCGGCCGCACTGGCGCGATCTAGAGCATATCCGTCTGGCGGCGCAACG TTTCGGTGACAACGAGCTCAGCTCGCGCATCCTGCTGCCGCGCCGTTCCACCGTGCGTGAGCTGGCGGGGCACTTCAACCAGATGGCCGAGCGTATCGAA AGCCTGATCGCCAACCAGCGCGAACTCACCAACGCCGTGTCCCACGAACTGCGCACGCCCATTGCACGCCTCTCGTTCGAACTCGACCAACTCAAGCAGC AGGCCGACCCGCGCCAGCGTGGCGAATTGATTGCTGACATGTATGCAGACCTGGGCGAACTGGAAGAAATGGTCTCCGAACTGCTTACCTATGCCAGCCT GGAACGTGGCGCCACCCAGGTCACACGCGAAAGCATCGAGGCCCTCAGCTGGCTCGACAGCGTGATCGGCAGTGTGGCCCTGGAGGCCGAGGCGGCGGGT ATTCAATTGTCGTTGCGCACGTGTGAGGTGGACTTTATCCAGATCGAGCCACGCTTTATGGCACGTGCGGTGATCAACCTGTTGCGCAACGCCATCCGCT ACGCCGAGCGTCGGGTGGAAGTCTCGCTGGTCAAGTTCGGCAGCGGCTACGAAGTGCGGGTGTGTGACGACGGGCCCGGCGTCCCGGAGGACGGCCGGGC GAAGATTTTCCAACCCTTCATGCGCCTGGACGCGAGTCGCGATCGCCGTACCGGCGGCTTCGGCCTGGGCCTGGCGCTGGTGCAGCGGGTGTCGCAGTGG CATGGCGGCCAGGTGCAGGTGTTGGACTCGGAATGGGGCGGCGCCTCATTCCGAATGACGTGGGCGTACGTTGAGTCATAG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GGTTATCGAGTGAATTGGCGCGGCCTATAAGTGATTCTCAGGTCGTCATGTATAGGAGGCAGGCCGGGCGGAGCGATATTGATCCTGATGGTTTGACCAT GGTTTTTTTGGATGTGCGGAATGGCTTTTCCATTAAATAAACCTTCCGTCAATAGATCGGTGGCTTGCTCAATAACTGCCGACGTCCCATTGGGATAGTT TCGCAACACCTCATTTCGTACTCCGTTTCGTATGGCGGTTACGGATGTCGAGCCATGCGTCAATGAGACGGTCCCTTCAAACGCCTTGACCGGTTTGTTT ATTTCTTGTTGAAAGAGGCGCCCAAATGCTTTGCTTCTGCCTTCAGCGGAGTAGCACACCAGAAGGCGTACGTTATCGGCAGAAGTAAGGTCCACACCCT TTGCTCTCAGCAGCTTCGCTAACCCAGGCGCATCATAAAGCGTGTTGTCCATGATTATCTTCGTACCGTCACCTGTGATCCGCTCAACCCAATTTCGTTT
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Amino Acid Sequence |
>ATPase
MLRLYIRLYIILALGLAGAIWLVNYTFDELLPEANETYNREAMRGPAYALVEQLRPLLGDARQARLGELQPHYGLHLKLVQRDDLALNPREQQLLAAGQL VVRGDFMEFIANLDGGPQLLNIKLPDEPKWLYLWAYSLLGLSLAIVLYFWVRPHWRDLEHIRLAAQRFGDNELSSRILLPRRSTVRELAGHFNQMAERIE SLIANQRELTNAVSHELRTPIARLSFELDQLKQQADPRQRGELIADMYADLGELEEMVSELLTYASLERGATQVTRESIEALSWLDSVIGSVALEAEAAG IQLSLRTCEVDFIQIEPRFMARAVINLLRNAIRYAERRVEVSLVKFGSGYEVRVCDDGPGVPEDGRAKIFQPFMRLDASRDRRTGGFGLGLALVQRVSQW HGGQVQVLDSEWGGASFRMTWAYVES
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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