Strain | Pseudomonas fluorescens strain PCL1751, complete genome. [Details] | |
DNA Sequence Upstream of Gene |
CACCAACCTGAACCTGGAAGACATGGTCCGCGACGGCCGCTTCCGTGAAGACTTGCTGTACCGCCTCAACGTGATCACCTTGCACCTGCCGCCGCTGCGC GAGCGCAGTGAAGACATCCTGACCCTGGCCGACCGCTTCCTGGCACGCTTCGTCAAGGAATACGCTCGCCCCGCGCGCGGTTTCAGTGATGAAGCGCGTG AAGCACTGCTCAACTACCGCTGGCCGGGCAATATCCGCGAGCTGCGTAACGTGGTGGAGCGCGCCAGCATCATTTGCCCGCAAGAGAAGGTGGAAATCAC CCACCTGGGGATGGCCGAGCAACCGGGCAACAACGCCCCACGCATTGGCGCGGCGCTGAGCCTGGACCAGCTGGAAAAAGCCCATATCGGCGCCGTACTT GCCACCAGCGACACCCTGGACCAGGCCGCCCGCACCTTGGGCATCGACGCGTCGACCCTGTACCGCAAACGCAAACAGTACAACCTGTGAGCTGTACCTT
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DNA Sequence for Gene |
>PF1751_RS00445
ATGAAGTTAGCGATGAAGCTGCGCACTCGGCTGTTCCTGAGTATCTCAGCGTTGATCACGGTCGCCCTGTTGGGTTTGATCCTGGGCCTGGTCAGCGTCA TGCAAATGGCCAAGACCCAGGAATCCCTGATTCGCAGCAACTTCATTACGCTGGACCTGGGGCTGAAGCTGCGCCAGAGCCTGGGCGATCAATTGATCAT GATGCTGGAGGACCGGCCCGACCCCGAGGCACTGAAAGCCTCCAAGCAACATTACTTCGACCTGCTGGACCAGGGCATTGCCCATGAACAGCGCGACAAT CGTGGGAGTGGATTCAGCCTGGCCCGAAGCCAGTATCAGGACCTGTTGGATGCGTTTGACGAATCCCAGCAACCGACGCCCCCTCCAGGCGCCAAGGAAA AGCTCACTGAAACCTTCAATGCCTTGCGCAATGGCCTGATCAACGAGCACAAGCAGGCACTGGAAAACATCAGCAACAGCGAACACAAGTCGCGCGAGCG CGCTTTGCTGATCGCCGGTTTGCTGGGGTTGGTGGGGCTTGCGGTGTTAATCATTGGATTTGTCACAGCCCACGGTATTGCTCGGCGTTTCGGCGGCCCG ATCGAAGCGTTGGCCAAAGCTGCCGACAAGATCGGCCAGGGCGATTTCGAAGTGACGCTGCCGATTTCGTCCGCAGCAGAAATGAACCAACTGACCCGCC GGTTCGGCATCATGGCCGAAGCGTTGCGCCAGCATCAGGCGACCAATGTCGATGAACTGCTGGCCGGCCAACAGCGCCTGCAAGCTGTACTCGACAGCAT CGACGATGGCCTGCTGATGATCGACCGTCAGGGCCGTCTGGAACACCTCAACCCCGTAGCCCAGCGCCAATTGGGCTGGGATGAGGAACGCCTCGGTCAA GGCCTTGGCGAAGCACTGGTACGCCCCGAGTTGGATGAGCAGCTGCAACTGGTACTGCGTGGCGGCAGCCTGGAGCGAGCGCCGGAGGATTTGGAGGTGG AGGTCGAAGGTGAATTGCGCCTGCTGACCTACAGCCTGACCCCCGTCAGTCATACCCAGGGGCATATTCTCGGTGCGGTGATGGTGCTGCATGACGTCAC CGAACAACGCGCCTTCGAACGGGTACGCAGCGAGTTTGTACTACGCGCTTCCCATGAGCTGCGTACGCCGGTGACCGGAATGCACATGGCCTTCGGGCTG TTCCGCGAGCGTGCGAAGTTTCCGGCGGAGTCCCGTGAAGCGGATTTGCTGGATACGGTCAATGAAGAAATGCAACGCCTGATGCAGTTGATCAATGACC TGCTCAACTTCTCGCGCTACCAGAACGGCCTGCAGAAACTCACCTTGGGGCCATGCGATGTGACTGACCTGCTGGAACACGCCCGTGCGCGCTTCGTCGA GCCGGCCAATGCGCAAAACATCGAACTGCTGGTAGAAGCCCAATCCGACCTGCCCCGCTTGTATGCGGACCAGGCACAACTGGAACGGGTACTCGACAAC CTGCTGGGCAACGCCCTGCGCCACACGGCGGCCGGTGGGCAGATTCGCCTGCAGGCGCGCCGTCATGGCGAGCGAGTGATTGTCAGCGTCGAGGACAACG GCGAAGGCATCGCTTATGGGCAACAGGGACGAATCTTCGAGCCGTTCGTCCAGGTGGGCCGCAAGAAAGGTGGCGCCGGCCTGGGCCTGGCGCTGTGCAA GGAAATCGTGCAACTGCACGGCGGCCGCATGGGCGTGTATTCGCGGCCGGGGCAGGGCACTCAATTCTATATGGCGTTGCCGCTTTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
TTTCGGTTCAACGCACGCAGGATTGCGGCGCTTTCCGCATCCGGTGTGCCGTCGAAGAGTGACGGCCGGAAACGCATCTGAAACGCCGCAATGACATGAC GCGTGGCGACATCCAGTTCGCCGGTCTGGGGCGTCTGGTAGCCCAGGCGTGCCAATTCTTCCTGGAACCAGGTGATGCTCGGCAGCTCAGCGGCATATTG CACTTGGAACCGCGCAACAGCCTGGGCATTCGGCCACACCCCCAACCCTTCATCGGCCAGGCGCTTCCAGGGAAACAAAGGGCCCGGGTCCAGTTTGCGC AACGGTGCGATGTCACTGTGGCCAATGATGTTCTTGGGGTCGATGCCGTTGCGCTTGCTGATGTCCTTGAGCAGCACCACCAGGGATTTAACCTGCGCCT CCGAGTACGGGTACCACACGCGACCGGTCGGGGTGTCTTTGTAGCCAGGATTGACGATCTCGATGCCGATGGAGCTGGAGTTGAGCCAGGTGCGACCCAT
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Amino Acid Sequence |
>histidine kinase
MKLAMKLRTRLFLSISALITVALLGLILGLVSVMQMAKTQESLIRSNFITLDLGLKLRQSLGDQLIMMLEDRPDPEALKASKQHYFDLLDQGIAHEQRDN RGSGFSLARSQYQDLLDAFDESQQPTPPPGAKEKLTETFNALRNGLINEHKQALENISNSEHKSRERALLIAGLLGLVGLAVLIIGFVTAHGIARRFGGP IEALAKAADKIGQGDFEVTLPISSAAEMNQLTRRFGIMAEALRQHQATNVDELLAGQQRLQAVLDSIDDGLLMIDRQGRLEHLNPVAQRQLGWDEERLGQ GLGEALVRPELDEQLQLVLRGGSLERAPEDLEVEVEGELRLLTYSLTPVSHTQGHILGAVMVLHDVTEQRAFERVRSEFVLRASHELRTPVTGMHMAFGL FRERAKFPAESREADLLDTVNEEMQRLMQLINDLLNFSRYQNGLQKLTLGPCDVTDLLEHARARFVEPANAQNIELLVEAQSDLPRLYADQAQLERVLDN LLGNALRHTAAGGQIRLQARRHGERVIVSVEDNGEGIAYGQQGRIFEPFVQVGRKKGGAGLGLALCKEIVQLHGGRMGVYSRPGQGTQFYMALPL
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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