Pseudomonas fluorescens MEP34, RU10_RS06545 (flhF)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas fluorescens strain MEP34 contig_8, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
AAGGTCCTGCAAGCGCTGCTCTCCGAACACGTGCCGGTGCGCGACATTCGCAGCATCGCCGAAGCGATCGCTAACAACGCCGCCAAGAGTCAAGATACCG CCGCTCTGGTCGCCGCTGTGCGGGTCGGCGTATCCCGCGCCATCGTCCAAAGCATTGTAGGCACTGAGTCCGAGCTGCCTGTGATCACATTGGAACCAAG GTTGGAACAGATATTGCTCAATAGTCTGCAGAAGGCAGGACAAGGCTCGGAAGAGGGCGTTCTGCTGGAGCCAAGCATGGCCGAGAAGCTGCAACGTTCG TTGATCGAAGCGGCCCAGCGGCAGGAAATGCAAGGCCAACCGGTGATCCTGCTGGTAGCAGGCCCGATTCGCGCGATGCTCTCGCGCTTCGGCCGCCTCG CAGTCCCTGGGCTGCATGTGCTGGCCTACCAGGAAGTACCGGACAACAAGCAAGTGACCATCGTTGCGACAGTAGGGCCCAACGGCTGAGGTAGTGGTTT
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| DNA Sequence for Gene |
>RU10_RS06545
|flhF
ATGCAAGTTAAGCGTTTTTTCGCCGCCGATATGCGTCAGGCCATGAAGCTGGTTCGCGATGAGCTGGGCGCTGATGCCGCCATCATCGGCAACCGCCGCA TCGCCGGCGGCGTCGAGTTGACGGCGGCACTGGATTACAAGTTGTCGGCGCTGGCGCCGCGGGTTCCGAACATGGAGCTCGAAGACGAACTGCGCAAGAC CCAGTCGCGCATCGTCACCGCCCAGGCCGAACTGAGCCTGCGTGGCGAAGCCGACGGCAACACCAATCAGCAATTGTTCGCCGGGCTGCCATTGACCGCA GGCCTGCCGCTGACCGCTGCCGAGCCGCTGAGCGAGCCGACCTACGCTGCCCCGGCGCGTCCGGCCGCAGCGCCTGCGCAGGCCTCGGCGGGTGTCGATC CGCGTGCGCTGGATTCGATGCGTTTTGAATTGAATAGCCTGCGCGAGCTGATGGAAGTGCAGCTCGGCACCCTGGCCTGGAATCAGCTGCAAGGCAGCCG TCCGGCTCAGGCCAATCTGTATCGCCGTTTGCAGCGCATCGGCCTGTCGGGCCCGCTGTCGCGTGATCTGTTGGCGCTGATCACCGATATCGAAGAGCCG CGTCAGGCCTGGCGCATGCTGCTCGCGCATCTGGCGCGGATGATTGCCGTACCGGAAGTCGAGCCGCTGGAAGAGGGCGGTGTGATTGCCATGGTCGGCC CGGCCGGCATGGGCAAGACCACCACGCTGGCCAAGCTTGCCGCGCGTTATGTGCTCAAGTACGGCGCGCAGAACGTTGCGCTGGTGAGCATGGACAGCTT CCGCATCGGCGCGCAGGAACAACTGAAAACCCTCGGGCGCATTCTCAACGTGCCGGTGACCCACGTCGATCCGGGCCAGTCGCTGGTTCAGGCATTGGAT CCACTGCTACGCAAACGCGTGGTTTTGATCGATACTGCCGGGCTGCAAGCCAGTGATCCGGCGTTGCGCATGCAGCTTGAGAGTCTGGCCGGGCGTGGCA TTCGCTCGAAAAATTATCTGGTACTGGCAACCACCAGCCAGAAACAGGTTCTAACCGCCGCTTATCACAGTTACAAGCGTTGCGGGCTGGCCGGTTGCAT CCTGACTAAACTGGATGAAACGGCCAGTCTCGGCGAAGTGTTGAGCCTGGCGATCAGTCATGAATTGCCGGTCGCGTACCTGACCGATGGCCCACGGATT CCGGATGATCTGCATCTGCCGCGCCGTCATCAACTGGTCAGCCGCGCCGTCAGCGTGCAAATGCAGGAAGAACCCAGCGAAGAAGCCATGGCTGACATGT TCGCTGATATCTATCACAGCCCGACCAAGCAGGTTGGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GGTAATCATGAACAGTTTTTGTACCTACATCGATGGTCTGCCACGCATTGTTCCGATCGGGAACGCGCAGCCAGTAATGTGGCCTCCGTCTATGCAAGAC AAGGTAAAGAAATAACATGGGCAGCATGCATCCCGTACAGGTGATCGCGGTGACCGGCGGCAAAGGTGGCGTCGGCAAGACTAACGTGTCAGTGAACTTG TCGCTGGCGCTGGCAGAGCTTGGCCGTCGGGTCATGCTGCTGGACGCCGACCTGGGCCTGGCCAACGTCGACGTTCTGCTGGGGCTGACGCCCAAGCGCA CACTGGCTGACGTGATCGAAGGCCGTTGCGAATTGCGCGACGTGCTGTTGCAGGGCCCGGGCGGGATTCGCATCGTGCCGGCGGCCTCCGGCACGCAGAG CATGGTGCACCTGAGCCCGGCGCAACACGCCGGCCTGATCCAGGCGTTCAGCGACATCGGCGACAATCTCGACGTGCTGGTGATCGACACCGCTGCGGGT
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| Amino Acid Sequence |
>flagellar biosynthesis regulator FlhF
MQVKRFFAADMRQAMKLVRDELGADAAIIGNRRIAGGVELTAALDYKLSALAPRVPNMELEDELRKTQSRIVTAQAELSLRGEADGNTNQQLFAGLPLTA GLPLTAAEPLSEPTYAAPARPAAAPAQASAGVDPRALDSMRFELNSLRELMEVQLGTLAWNQLQGSRPAQANLYRRLQRIGLSGPLSRDLLALITDIEEP RQAWRMLLAHLARMIAVPEVEPLEEGGVIAMVGPAGMGKTTTLAKLAARYVLKYGAQNVALVSMDSFRIGAQEQLKTLGRILNVPVTHVDPGQSLVQALD PLLRKRVVLIDTAGLQASDPALRMQLESLAGRGIRSKNYLVLATTSQKQVLTAAYHSYKRCGLAGCILTKLDETASLGEVLSLAISHELPVAYLTDGPRI PDDLHLPRRHQLVSRAVSVQMQEEPSEEAMADMFADIYHSPTKQVG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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