Pseudomonas fluorescens MEP34, RU10_RS04355
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas fluorescens strain MEP34 contig_7, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
AAGCCGAGCGCCTGTGCGGGCTGAAAAGCCGCACCTTCCTCGCCGAGCTGATGCCGCATTACCCGATCTACGTGCCGCTGCTGCCGGACTCCGCGCAAGA GGCGATGGGTCAGGTGCACCCGCGGGCGCAGATCACCTTCGACATCCTGATGCGCGAAGGCTTCGAGACCGATCACTACATCGACATCTTCGACGGCGGC CCGACCCTGCATGCGCGGGTTTCCGGGATCCGTTCAATCGCGCAGAGCCGCGTGGTGCCGGTGAAGATCGGCGAGCCGGTCAAAGGCGCCGGGCGTCAGT ATCTGGTGGCCAACGCGCAGTTGCAGGATTACCGCGCGGTGTTGCTCGAGTTGGATTACGCGCCGGGCAAACCGGTGACGCTGGATATGGAAGCGGCCGA AGCCCTGGGCGTCGGTGAAGGTGCCAGCGTGCGCCTGGTGGCGGTTTAACGCCTTAGCGAGTTTCACGGGTGGCGCGAGCGGCCCGTTTGAGGAGATAGC
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| DNA Sequence for Gene |
>RU10_RS04355
ATGATTGTTCGTCCCGTACGCAGCAGCGATTTATCCGCGCTGATCGACCTGGCCCGCAGCACCGGCACCGGCCTGACCACTTTGCCGGCCAACGAAGAGC GCCTGACCCACCGGGTCGGCTGGGCCGAGAAGACCTTTCGCGGCGAAGCCGGGCGTGGCGATGCGGACTACCTGTTCGTGCTCGAAGACGACGACGGCCG CGTGGTGGGCATTTCCGCCATCGCCGGAGCGGTCGGCCTGCGTGAGCCCTGGTACAACTTCCGCGTCGGTCTGACCGTCAGTGCGTCGCAAGAGCTGAAC ATCTATCGCGAAATTCCGACACTGTTCCTGGCCAACGACCTGACCGGTAATTCCGAGCTGTGCTCGCTGTTCCTGCACGCCGATTACCGCAACGGACTGA ACGGTCGCATGCTGTCCAAGGCACGCATGCTGTTCATCGCCGAGTTCCCGGAGCTGTTCGGCAACAAGATCATCGCCGAAATGCGCGGCGTGTCCGACGA CGCCGGGCGCTCGCCGTTCTGGGAGAGTCTTGGCCGGCATTTCTTCAAGATGGAATTCAGCCAGGCGGATTACCTGACCGGCGTCGGCAACAAGGCGTTC ATCGCCGAACTGATGCCGAAATTCCCGCTGTACACCTGCTTCCTCTCGCCGGACGCGCGCAATGTCATCGGCCAGGTGCACCCGGACACCGAACCGGCGC TGGCGATGCTCAAGAGCGAAGGCTTCAGCTATCAGGGTTACGTCGACATCTTCGACGCCGGCCCGGCCATCGAATGCGAAACCAGCAAGATCCGCGCAGT GCGTGACAGCGAAGCGCTGGTGCTGGCCGTGGGCACGCCGGGCGATGACGCCACGCCGTTCATCATCCACAACCGCAAGCGCGAGGATTGCCGCATCACT GCCGCGCCAGCGCGTCTGGCAGCGGGCACCCTGGTGGTCGATCCGCAGACCGCAAAACGTCTTCAACTCAGCGCCGGCGATCAGGTTCGCGCCGTGGCGC TGTCCGCTGCACGGGAGTCGAAATAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TGAATTCGCTATACATCGCAGGTGAGTGGCTGGCCGGTCAGGGCGAAGCCTTTCAGTCGCTGAACCCGGTGACCCAGCAAGTGCTGTGGGCGGGTGAGGG CGCGACGGCCGCGCAGGTCGAGTCGGCGGTGCAGGCTGCCCGTCAGGCCTTTCCTCAATGGGCACGTCGCACGCTCGAAGAGCGCATCAGCGTGCTCGAG GCTTTCGCCGCGTCGCTGAAAAACCACGCTGACGAACTGGCTCGCACCATCGGTGAAGAAACCGGCAAGCCGCTGTGGGAGTCCGCGACTGAAGTGACGA GCATGGTCAACAAGATCGCCATCTCGGTGCAGAGCTACCGCGAACGTACCGGCGAGAAGAGCGGCCCGCTGGGTGACGCCACCGCCGTATTGCGCCACAA GCCCCACGGCGTGGTCGCGGTGTTCGGTCCTTACAACTTCCCCGGCCACTTGCCCAACGGTCATATCGTGCCGGCGCTGCTGGCCGGTAACAGCGTGCTG
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| Amino Acid Sequence |
>arginine succinyltransferase
MIVRPVRSSDLSALIDLARSTGTGLTTLPANEERLTHRVGWAEKTFRGEAGRGDADYLFVLEDDDGRVVGISAIAGAVGLREPWYNFRVGLTVSASQELN IYREIPTLFLANDLTGNSELCSLFLHADYRNGLNGRMLSKARMLFIAEFPELFGNKIIAEMRGVSDDAGRSPFWESLGRHFFKMEFSQADYLTGVGNKAF IAELMPKFPLYTCFLSPDARNVIGQVHPDTEPALAMLKSEGFSYQGYVDIFDAGPAIECETSKIRAVRDSEALVLAVGTPGDDATPFIIHNRKREDCRIT AAPARLAAGTLVVDPQTAKRLQLSAGDQVRAVALSAARESK
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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