Pseudomonas fluorescens MEP34, RU10_RS03830
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas fluorescens strain MEP34 contig_6, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
AAGCGGCTCAGCCGCGCCAGCAACCAACGCATGGTCAGGGTTGAGGGTGCCTTCATGCGCAGGATGTCGTCCTCGGCGCGCAAGGTGTTGCAGGCGCGCT CGAGGGCGGCAAAGCCTTCGCGGATACCGGGCAACAGCAGCCGGGCCGATTCGGTCAGTTGCAAGTTGCGGCCGCTGCGATGAAACAGCCGGCAGGCGAA ATGTTCTTCGAGGGTACGCATGTGCCGACTGACCGCGCTCTGGGTAATCGACAATTCTTCCGCCGCGCGGGTGAACGAGCTGTGTCGCGCTGCCGCTTCG AATGCACGCAGGGCATACAGGGGCGGAAGGCGTCGGGACATACACAAAGCTCCAGTAGCGGGATGCAGCCGGTTCGGCCGAGACGGTTCAGGATGAGTAT TAATCATGCCACCCATCCTTTTTATCCCTTTGTGCAACGCCTGCCAAGCGCCGAGAATCGACGCTCTTCTGTTCCCTTTGATATTTGGGTGGTGATGACC
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| DNA Sequence for Gene |
>RU10_RS03830
ATGCGGCATCCTGTGCGTACCGAACTCTGGGCCATTCTGCGGCTGGCGGGGCCGCTGATTGCTTCGCAGTTGGCGCACATGCTGATGGTGCTGACCGACA CCCTGATGATGGCGCGCTTGAGTCCAGAAGCGCTGGCCGGTGGCGGCCTCGGTGCGGCCAGCTATTCGTTCGTGTCGATTTTCTGCATCGGCGTGATTGC AGCGGTCGGCACACTGGTGGCGATCCGTCAGGGCGCCGGCGACATCATCGGTGCCGCGCGCCTGACACAGGCCGGACTGTGGCTGGCCTGGCTGATGGCG CTCGGCGCCGGGCTGCTGTTGTGGAACCTCAAACCCGTGTTGCTGCTGTTTGGCCAGACCGAAACCAACGTCAACGCCGCCGGGCAATTCCTCATCGCCC TGCCCTTCGCCTTGCCGGGTTATCTGAGCTTCATGGCGCTGCGCGGTTTCACCAGCGCGATTGGTCGGGCGACACCAGTGATGGTGATCAGCCTCGCCGG CACGGTGGCCAATTTCCTGCTCAACTACGCGCTGATCACCGGCATGTTCGGCCTGCCGCACCTGGGTCTGACCGGCATCGGTCTGGTCACGGCGATTGTC GCCAACTGCATGGCACTGGCGCTGGCCTGGCACATTCGCCGGCATCCGGCCTATAACGCTTATCCGTTACGCGTCGGTCTGTCGCGGCCGAACCGGCAAT ACCTGAAAGAACTCTGGCGCCTGGGCCTGCCGATTGGCGGCACCTATGCGGTGGAGGTCGGGTTGTTCGCTTTCGCTGCACTGTGCATGGGCACCATGGG CAGCACGCAAATGGGCGCGCACCAAATCGCTCTGCAGATCGTTTCTGTGGCGTTCATGGTTCCGGCCGGGATGTCCTATGCCATCACCATGCGCGTCGGC CAGCACTATGGCGCCGGGCAACTGGTTGATGCGCGGATGTCCGGCCGTGTCGGCATTGCCTTCGGCGCGGTAGTGATGCTCGGCTTTGCCCTGGTGTTCT GGCTGTGGCCGAACCAGTTGGTCGGCCTGTTCCTCGACCATAACGACCCGGCGTTTGCCGAGGTGATCCGTCTGGCGGTGAGCCTGCTGGCAGTAGCGGC GTGGTTCGAGTTGTTCGACGGCACGCAGACGATTGCCATGGGCTGTATCCGCGGGCTCAAGGATGCCAAGACCACATTCCTGGTCGGCCTGGCTTGCTAT TGGCTGATCGGCGCGCCGGCGGCATGGTGGATGGCTTTCCACCTCAATTGGGGGCCGACCGGTGTCTGGTGGGGACTGGCGCTGGGGTTGGCGTGCGCGG CAGTGAGCCTGACGCTGGGGTTTGAATGGAAGATGCAGCGGATGATTCGGCGCGAGCCGCAAGCTCAAGGTTTTAACATCCCCCAGGCCGAATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GGTCCTCTGTAGGAGTGAGCCTGCTCGCGATTGCGGTATATCAGTCAATGCAAATGTTGACTGTTGAAAAGCTATCGCGAGCAGGCTCACTCCTACAGGG GGTGGTGATCAGCCGACGATTTCCAGAGCCGGCTGCTGGCTCGATCCCGACGTCAGGTATTCCACCAGCTCCTCCAGCGGCAACGGCCGGCTGATCAGAT AACCCTGCACCTGATCGCAACCGAACCCGCGCAACAAGTCCAGCTGCTCCGGCGTCTCGACCCCTTCGGCAACCACTTCCAGGTGCAGGTTGTGCGCGAG GTTGATCATCGCGTGCACCAGTTTGCGGTTCTCTTCGCGCTGTTCCATACCGCCGACAAAACTCTTGTCGATCTTCAGCAAAGTGATCGGCAGGCTGTTG AGGTGCACGAACGAAGAAAAACCGGTGCCGAAATCGTCCAGCGAGAAGCGCACGCCGAGGCGGCCGAGAGCGTCCATGGTCTGCTTGACCAGATCGCTGC
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| Amino Acid Sequence |
>multidrug transporter
MRHPVRTELWAILRLAGPLIASQLAHMLMVLTDTLMMARLSPEALAGGGLGAASYSFVSIFCIGVIAAVGTLVAIRQGAGDIIGAARLTQAGLWLAWLMA LGAGLLLWNLKPVLLLFGQTETNVNAAGQFLIALPFALPGYLSFMALRGFTSAIGRATPVMVISLAGTVANFLLNYALITGMFGLPHLGLTGIGLVTAIV ANCMALALAWHIRRHPAYNAYPLRVGLSRPNRQYLKELWRLGLPIGGTYAVEVGLFAFAALCMGTMGSTQMGAHQIALQIVSVAFMVPAGMSYAITMRVG QHYGAGQLVDARMSGRVGIAFGAVVMLGFALVFWLWPNQLVGLFLDHNDPAFAEVIRLAVSLLAVAAWFELFDGTQTIAMGCIRGLKDAKTTFLVGLACY WLIGAPAAWWMAFHLNWGPTGVWWGLALGLACAAVSLTLGFEWKMQRMIRREPQAQGFNIPQAE
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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