Pseudomonas fluorescens MEP34, RU10_RS24995

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas fluorescens strain MEP34 contig_38, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GAAGAGCCTCGACGGGCAGAACATTCGCCTGCCGGGTTACATCGTGCCACTGGAAGTCAGCGAAGAGGGACGCACCACGGACTTCTTGCTGGTGCCGTAT TTCGGCGCCTGCATCCACGTACCGCCACCGCCGTCGAACCAGATCGTTCATGTAAAAAGCGAGCTGGGGGTGAAGCTCGATGAGCTGTATCAGCCGTACT GGGTTGAAGGACCGTTACAGGTGAAAGCCTCGAGCAGTGAACTGGCCGATGCCGGGTATCAGATGGAGGCGGAGAAGATTTATGCGTATGAGCTGCCGGA GTAGACTCCGGTAGATTTCAAGATCAAAAGATCGCAGCCTTCGGCAGCTCCTACATGGGATCGCATTTCAACTGTGGGAGCTGCCGAAGGCTGCGATCTT TTTGGGGGTATTACGGTTTCATTGAGCTGAGTCAAAACACCGTATCAGACAGCTTCGTACCCTAGGACATCGAACATTTTTCATGTCTTTCGGAGCCCCC
DNA Sequence for Gene
>RU10_RS24995
ATGAACAAGTCCTTGCTCAGCGCCTCGCTGTTTGCCCTTGCGCTCGCAGCCCCGCTCGCCCACGCCCACGAGGCGGGTGACATTCTCGTGCGCGCCGGCG CGATCACCGTCAACCCGAAGGCCGACAGCTCCAGCGTCAAGGTCGATCAGGGCCCGCTGAGCGGCACCAATCTGGGCGGCAAGGCGACCATGAGCAGCGA CACCCAACTGGGTCTAAACTTCGCCTACATGCTCACCAATAACATCGGCATCGAACTGCTGGCAGCCACGCCGTTCGAGCATGACGTCAAGCTCAAAGGC ACCGCCCTGCCCGCCGCCAACGGCAAGCTCGGCACCCTCAAACACCTGCCGCCGACCCTTAGCGTCGTCTACTACCCGCTGGATTCGAAATCGCCGTTCC AGCCCTATGTCGGCGGCGGCATCAACTACACCTGGATCTACGACGAACACGTCGGCAGCGAAGCCAGCGCCAACGGCTTCAGCAACTTCAAGGCGAAAAA CTCCTGGGGCCTGGCCTGGCAGGTCGGCGCCGACTACATGATCACCGACAACATCATGCTCAACGCCCAGGTGCGCTACATCGATATCGACACCCGCGCG ACCGTCGAGAACAACGCCGTCGCACCCGGCACCCGTGCACGGGTGAATGTGGACGTCGATCCGTTCATCTACATGGTCGGTCTGGGCTATAAGTTCTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GTCGATTTTTAACCGAACGTTCACGTGGTGGTGAATGAGGCTTGGTGGCGGGCAGGCACAGACCTGACGACGACCGTACGCAGTCGATCGGGGGATAAGA TTCCCTCGTCACAGGGATAGCGATATTCCGGCCGTGAAAAAGGCGCCTGTTGCAGGGCGCCTTTTTCATTTGGGAACTGAGGTCATGTGGTGCGTTCGAG ATCCGGCCCCTCACCCCAGCCTTCTCCCGAGGGAGAGGGAGCCGATTTGTGTGTTGTTCAAAACCTGAGTTCGGCTCGGTATTTCAGGTCGGCGTATTTC GCCCAGTCACCCTGGTCAGTCCCCTCTCCCTTTGGGAGAGGGTTAGGGTGAGGGCTTTATCAGGCACGCCCGAGCAGCCGCGCCAAGCCCACACTCATCG GCGTCTGCGGCGGCATTTCAAAGCGCTGCAGCAAGCGTCGGTTATCCGCCCGTGAATGGCGGATATCACCCGAACGTGCCGGCCCGTAACTCACGGGCGG
Amino Acid Sequence
>membrane protein
MNKSLLSASLFALALAAPLAHAHEAGDILVRAGAITVNPKADSSSVKVDQGPLSGTNLGGKATMSSDTQLGLNFAYMLTNNIGIELLAATPFEHDVKLKG TALPAANGKLGTLKHLPPTLSVVYYPLDSKSPFQPYVGGGINYTWIYDEHVGSEASANGFSNFKAKNSWGLAWQVGADYMITDNIMLNAQVRYIDIDTRA TVENNAVAPGTRARVNVDVDPFIYMVGLGYKF
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site