Pseudomonas fluorescens MEP34, RU10_RS24555
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas fluorescens strain MEP34 contig_38, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
TGCGCGAGGCCGAAGCGCTGCGCAATCTGTGCGAACGTTACAAGACTCAGCTGATCATCAACGACGACGCCGAACTGGCCGCGCGCCTCAACGTCGGCGT GCATCTCGGCCAGACCGACGGCCCGCTTTCGCCGACCCGCGCCCTGCTCGGTTCGAAAGCCATCATCGGTTCGACCTGCCACGGGCAGATCGCCCTGGCC GAACAAGCCGCCAAAGAAGGCGCGAGTTACGTCGCCTTCGGCCGCTTCTTCAATTCCACCACCAAACCCGGTGCGCCGAGTTGCAGCCTCGACCTGCTCG ACGAAGCCAAACGCAAGCTGCACTTGCCGATCTGCGCGATTGGCGGCATCACCCTCGATAACGCCGCGCCGCTGGTCGAGCACGGTGTCGATCTGCTCGC CGTGGTCCATGGCCTGTTCGGTGCTGACAGCAGTGCTGAAGTGACCCGCCGCGCCCGTGCCTTCAACGAACTTCTGAAAATCTGATTTGAGAGCCCGATC
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| DNA Sequence for Gene |
>RU10_RS24555
ATGTCTCGTTCCGAAACCCTGTTTGCCAATGCTCAGAAACACATTCCCGGTGGCGTCAACTCGCCGGTTCGCGCGTTCAAGAGCGTCGGCGGCACCCCGC TGTTCTTCAAACACGCCGAAGGCGCTTACGTCACCGACGAAGACGACAAGCGTTATGTGGATTATGTTGGGTCGTGGGGTCCGATGATCCTTGGCCACAG CCATCCGGACGTGCTCGATGCGGTGCGCAATCAGCTGCAACACGGCCTGTCCTATGGCGCGCCGACCTCGATGGAAACCGAGATGGCCGATCTGGTCTGC TCGCTGGTGCCGTCGATGGACATGGTGCGCATGGTCAGCTCCGGCACCGAAGCGACCATGAGTGCGATCCGTCTGGCCCGTGGTTTCACCGGCCGCGACA GCATCATCAAGTTCGAAGGCTGCTACCACGGCCACTCCGACAGCCTGCTGGTCAAGGCCGGTTCCGGCGCACTGACCCAGGGCGTACCGAGCTCGGCCGG CGTGCCGGCAGCGTTCGCCAAACACACCCTGACCCTGCCGTTCAACGACATCGATGCGGTTGAGGCGATGCTCGCCGAAGTGGGTGAGGAGGTGGCGTGC ATCATCGTTGAGCCGGTGGCTGGCAACATGAACTGCGTGCCGCCAGCGCCGGGCTTTCTCGAAGGCCTGCGTTCGCTGTGCGACAAGCACGGCGTGGTGC TGATCTTCGACGAAGTGATGACCGGTTTCCGCGTCGCCCTCGGCGGTGCCCAGGCGCACTACGGCGTGACGCCAGACCTGACCACCTTCGGCAAGATCAT CGGCGGCGGCATGCCGGTGGGCTGCTTCGGTGGCAAGCGCGAGATCATGCAGCGCATCGCCCCGCTGGGGCCGGTGTATCAGGCAGGTACGCTGTCGGGT AATCCGCTGGCGATGGCGGCCGGCCTGACGACTCTGCGTTTGATCAGCCGCCCGGGTTTCCACGCCGAATTGACCGACTACACCACGCGCCTGCTCGATG GCCTGCAAGAACGCGCCGATGCTGCGGGCATTCCGTTCGTGACCACTCAGGCCGGCGGCATGTTTGGCCTGTATTTCAGTGGGGCCGACGACATCGTCAC TTTCGACGACGTGATGGCCAGCGACGCGGCCCTGTTCGGTCGCTTCTTCCACCTGATGCTGGAAGGTGGCGTGTACCTGGCGCCGAGTGCGTTCGAAGCC GGTTTCACCTCGATCGCCCATGGCGAAGCCGAGTTGCAACTGACGCTGGACGCTGCCGAGCGCGCCTTCGCCGCATTGAAATAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TCGCCACACCGCTGACGTTGGCTATGGCCAGCGTCAGCTTTCACCTACATAGCCTCGGTTTTTCCGACGTGCCTGCGCAAATCCTGCCCGAATCGGGCGA TATATTCCCCACGCAGCAGAAAAACGAGTAAAGACTTTGTAAGGTTGGCCCTGCTTATTTCATAATGCGCGCTTATTGGATCCCTCGACGGGTCCGCGTG CCCTTCAGAGGTAAGTCGATTCCCATGAACCGCACCGGCCGCACCCTTGCATTGGGCTGCCTGTTGCTCCTTCAGCCCCTGCTCGCGCATGCACAAGCAG GCGGCAACTCGTTGTTGATCCCGGCGATGGGTCGTTGCACCCTCAATACTCAGCCGCAAGACGTCACGCAGGCATTGGCCGCCTGCCAGAAAGCGGCGGA TGAAGGGGATGCGCAAGCGCAGTACGAGTTGGGTGAGTTCTACTACGACGGCAAGAACGCGACGCGCGACCTCAATCAAGCCCTGAGCTATTTCGAAAAG
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| Amino Acid Sequence |
>glutamate-1-semialdehyde 2,1-aminomutase
MSRSETLFANAQKHIPGGVNSPVRAFKSVGGTPLFFKHAEGAYVTDEDDKRYVDYVGSWGPMILGHSHPDVLDAVRNQLQHGLSYGAPTSMETEMADLVC SLVPSMDMVRMVSSGTEATMSAIRLARGFTGRDSIIKFEGCYHGHSDSLLVKAGSGALTQGVPSSAGVPAAFAKHTLTLPFNDIDAVEAMLAEVGEEVAC IIVEPVAGNMNCVPPAPGFLEGLRSLCDKHGVVLIFDEVMTGFRVALGGAQAHYGVTPDLTTFGKIIGGGMPVGCFGGKREIMQRIAPLGPVYQAGTLSG NPLAMAAGLTTLRLISRPGFHAELTDYTTRLLDGLQERADAAGIPFVTTQAGGMFGLYFSGADDIVTFDDVMASDAALFGRFFHLMLEGGVYLAPSAFEA GFTSIAHGEAELQLTLDAAERAFAALK
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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