Pseudomonas fluorescens MEP34, RU10_RS23235

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas fluorescens strain MEP34 contig_33, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
ATCAGCGCGGCCTGGCTGCCCTGGGCGTCGAGCACCGAATAGAAGTCTTTCTGCTGCCAGGCGCGCTTGCCGAAGGCGTCATAGAACAGTCGCGTTGTCG GTGCGGCCTGGGTGCGTTCGCCGTCGTACACCGGCATCTTGCTCGCGCCACGCGCGGCGCCTTCGCCACTGCCCAGATTGAGCTGGCACGCCGAGTCGTA ACAGGCATGGCAGGCCACGCACTTCTCGGTGAAGATCGGTTGGATGTCCCTGCTGTAGGAAATCGAAGGCGGGATCGCGGGATCTTGCGCCGCGACGCTC CCGCTCAGGACCAGCAACAATAAACTGATGACGCGGTACGGCATGCTGCTGATCCCGAAGGTTAAAAAAAGGCTGCGATTCTACCGTTATAACGCTCGTA CCAACATGAGCGATATTCATGCAAAAGCCGCACGTGCTCTAAAAGCGCACAGGTTTGCTATGATCCCGCTCCTTCGTAATGGTCTTTTCGAGTAGTCCAC
DNA Sequence for Gene
>RU10_RS23235
ATGTCCGATCGCAACGTCCGCCTTCAAGCTCTCAAGCAAGCCCTCAAAGAGCGCATCCTGATTCTCGACGGCGGGATGGGCACGATGATCCAGAGCTACA AGCTCGAAGAGCAGGATTATCGCGGCAAGCGCTTCGCCGACTGGCCGAGTGACGTCAAGGGCAACAACGACTTGCTGGTGATCACTCGTCCGGACGTGAT CGGCGGCATCGAAAAAGCCTATCTGGACGCCGGCGCCGACATTCTCGAAACCAACACCTTCAACGCCACGCGCATTTCCATGGCCGATTACGGCATGGAA GAGCTGGCGTACGAGTTAAACGTAGAAGGCGCACGTCTGGCGCGCAAGATTGCCGACGCCAAGACCGCCGAAAACCCGGCCAAGCCGCGCTTCGTCGCCG GTGTGCTCGGCCCGACCAGCCGCACCTGCTCGCTGTCGCCCGACGTCAACAACCCCGGCTACCGCAACGTCACCTTCGATGAGCTGGTGGAAAACTACAC CGAAGCCACCAAGGGCCTGATCGAGGGCGGCGCCGACCTGATCCTGATCGAGACGATCTTCGACACCCTCAACGCCAAAGCGGCGATCTTCGCCGTGCAA GGTGTGTTCGAAGAACTGCACATCGAACTGCCGATCATGATTTCCGGCACGATCACCGACGCCTCCGGCCGCACCCTGTCCGGCCAGACCACCGAAGCGT TCTGGAACTCGGTGGCCCACGCCAAGCCGATTTCCGTGGGCCTGAACTGCGCCCTTGGTGCCAGCGAACTGCGCCCGTACCTGGAAGAGCTGTCGAACAA GGCCAGCACCCACGTTTCCGCGCACCCGAACGCCGGCCTGCCGAATGAATTCGGCGAGTACGACGAACTGCCATCGCAAACCGCGAAAGTCATCGAAGAG TTCGCCCAGAGCGGTTTCCTCAACATCGTCGGCGGCTGCTGCGGCACCACGCCGGGGCACATCGAAGCCATTGCCAAAGCCGTGGCCGGTTATGCACCGC GACAGATTCCGGACATCCCCAAAGCCTGCCGCCTCTCGGGCCTCGAGCCGTTCACCATCGATCGCAGCTCGCTGTTCGTCAACGTCGGCGAGCGCACCAA CATCACCGGTTCGGCAAAGTTCGCCCGGCTGATTCGTGAAGACAACTACACCGAAGCCCTCGAAGTCGCTCTGCAGCAGGTCGAGGCCGGCGCGCAGATC ATCGACATCAACATGGACGAGGGCATGCTCGATTCGAAGAAGGCCATGGTCACCTTCCTCAATCTGATCGCCGGCGAACCGGACATCTCGCGTGTGCCGA TCATGATCGACTCGTCGAAATGGGAAGTCATCGAAGCCGGCCTCAAGTGCATTCAGGGCAAGGGCATCGTCAACTCGATCAGCATGAAAGAAGGCGTCGA GCAGTTCATCCATCACGCCCGACTGTGCAAGCGCTACGGTGCTGCAGTGGTGGTGATGGCGTTCGACGAAGCCGGTCAGGCCGACACCGAAGCGCGCAAG AAAGAGATCTGCAAACGCTCCTACGACATTCTGGTCAATGAAGTCGGCTTCCCGCCGGAAGACATCATCTTCGACCCGAACATCTTCGCCGTCGCCACCG GCATCGAAGAGCACAACAACTACGCCGTCGACTTCATCAATGCCTGCGCCTACATCCGCGACGAGTTGCCGTATGCGCTGAGCTCCGGCGGCGTGTCCAA CGTGTCGTTCTCGTTCCGTGGCAACAACCCGGTGCGTGAGGCGATTCACTCGGTGTTCCTGCTCTACGCGATCCGCGCCGGCCTGACCATGGGCATCGTC AACGCCGGTCAGCTGGAGATCTACGATCAGATCCCGGCGGAGCTGCGCGACGCTGTCGAGGACGTGATCCTCAACCGCACCCCGGACGGCACCGACGCCC TCCTCGCCATTGCCGACAAGTACAAGGGCGACGGCAGCGTCAAGGAAGCCGAGACCGAAGAGTGGCGCAACTGGGACGTCAACAAGCGTCTGGAACACGC GCTGGTCAAGGGCATCACCACGCACATCGTCGAAGACACCGAAGAGTCCCGACAGTCGTTTGCGCGGCCGATCGAAGTGATCGAAGGCCCGTTGATGTCC GGCATGAACATCGTCGGCGACCTGTTCGGCGCCGGCAAAATGTTCCTCCCGCAAGTGGTCAAATCCGCCCGCGTCATGAAGCAGGCCGTAGCCCACTTGA TTCCGTTCATCGAACTGGAAAAAGGCGACAAGCCGGAAGCCAAGGGCAAGATCCTCATGGCCACGGTGAAAGGCGATGTGCACGACATCGGCAAGAACAT CGTTGGCGTGGTGCTTGGCTGCAACGGCTATGACATCGTCGACCTCGGCGTGATGGTCCCGGCCGAGAAGATTCTGCAGGTCGCCAAGGAACAGAAATGC GACATCATCGGCCTCTCCGGCCTGATCACCCCGTCGCTGGATGAAATGGTTCACGTTGCCCGCGAAATGCAGCGCCAGGATTTCCATCTGCCGCTGATGA TCGGTGGCGCGACCACCTCAAAGGCGCACACGGCGGTGAAGATCGAACCGAAGTACAGCAACGACGCGGTGGTCTACGTGACCGATGCCTCGCGCGCCGT GGGTGTGGCGACGCAGTTGCTGTCCAAGGAATTGAAAGCCGGTTTCGTCGAGAAAACCCGTCTGGAATACATCGACGTGCGCGAGCGCACGTCCAATCGC AGCGCCCGCACCGAACGCCTGAGCTATGCCGCCGCGATCGCCAAGAAGCCACAATTCGACTGGGCCAGCTATCAGCCAGTGCAACCGACCTTCACCGGCA GCAAGGTGCTCGACAACATCGATTTGAAGGTGCTGGCTGAATACATCGACTGGACACCGTTTTTCATCTCCTGGGACCTGGCCGGCAAATTCCCGCGCAT CCTCGAGGACGAAGTGGTCGGTGAAGCCGCCACCGCGCTGTACAAGGACGCCCGGGAAATGCTCGCCAAGCTGATCGACGAAAAGCTGATCAGCGCCCGC GCGGTATTCGGTTTCTGGCCGGCCAATCAGGTCAACGAAGACGATATCGAGCTGTACGACGATAACGGCAAGCCGTTGGCCAGGCTGCATCACCTGCGTC AGCAGATCATCAAGACCGACGGCAAACCGAACTTCTGCCTCGCCGACTTCGTTGCGCCGAAGGACAGCGAAGTCACCGATTACGTCGGCGGTTTCATTAC CACTGCCGGCATCGGCGCCGAAGAAGTGGCCAAGGCCTATCAGGACGCTGGCGACGACTACAACTCGATCATGGTCAAGGCCCTCGCCGACCGCTTGGCC GAGGCCTGCGCGGAATGGCTGCACCAGCAAGTGCGCAAAGAGCACTGGGGTTATGCCAAGGACGAAACCCTCGATAACGATGCGCTGATCAAAGAGCAAT ACCGTGGCATCCGCCCCGCTCCCGGCTACCCGGCCTGCCCGGATCACACCGAGAAAGCCGCGCTGTTCACCCTGCTGGACCCGGAAGCGGCCGAAATGCG TGCCGGGCGCAGTGGCGTGTTCCTCACCGAGCACTACGCGATGTTTCCCGCTGCTGCAGTCAGTGGCTGGTACTTCGCCCATCCGCAGGCGCAGTACTTT GCCGTGGGCAAGATCGACAAGGACCAGGTGCAGAGCTACACCGCGCGCAAAGGCCAGGACCTGAGCGTGACCGAGCGCTGGCTGGCGCCGAATCTGGGTT ACGACAGCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GATCCATGAGGCCCGACAGCACCTTGCTCCCGGGCCTCATCATTCATCCGCTCACGGGCGCCATGATGGGCCGGGCTGCGGTGAAGAAGGATCAGGTTGT GCCGTGCCTTCGCCCGCCAGTGCCAGACTCTGCATTTGCGCGCGAGACAGTTCTTTCAGCTTTTCAATGCGCGCTTCCGCCAGTTCGATCTCCAGTGCGG CCATCGCCTCCAGGTAGCGGTTACGAGTCGCCTCGCTATCGTCTTTGTCCGGGTAGAGATCCTCGACCTCCTCCTGACGCCGGCTCGCGTTGCTTTCGAG TGTCTCGAATTCCTCGGGGTTGCGCTCGCGCAAATAGCGGATCCAGTAATCGCGACCGATCAGGTCCTCCAGAAACCTGTCCGACGCTTCATCGGCGAGA ACGGCTGCACGCGCATCAATCAACCGCTGCCCGCGAATCGGTGTGGCGTACAGCATGTGCTCTGGTTGCGCCGGCAATTCCAGGCCGTCCGGCCAGCCGC
Amino Acid Sequence
>methionine synthase
MSDRNVRLQALKQALKERILILDGGMGTMIQSYKLEEQDYRGKRFADWPSDVKGNNDLLVITRPDVIGGIEKAYLDAGADILETNTFNATRISMADYGME ELAYELNVEGARLARKIADAKTAENPAKPRFVAGVLGPTSRTCSLSPDVNNPGYRNVTFDELVENYTEATKGLIEGGADLILIETIFDTLNAKAAIFAVQ GVFEELHIELPIMISGTITDASGRTLSGQTTEAFWNSVAHAKPISVGLNCALGASELRPYLEELSNKASTHVSAHPNAGLPNEFGEYDELPSQTAKVIEE FAQSGFLNIVGGCCGTTPGHIEAIAKAVAGYAPRQIPDIPKACRLSGLEPFTIDRSSLFVNVGERTNITGSAKFARLIREDNYTEALEVALQQVEAGAQI IDINMDEGMLDSKKAMVTFLNLIAGEPDISRVPIMIDSSKWEVIEAGLKCIQGKGIVNSISMKEGVEQFIHHARLCKRYGAAVVVMAFDEAGQADTEARK KEICKRSYDILVNEVGFPPEDIIFDPNIFAVATGIEEHNNYAVDFINACAYIRDELPYALSSGGVSNVSFSFRGNNPVREAIHSVFLLYAIRAGLTMGIV NAGQLEIYDQIPAELRDAVEDVILNRTPDGTDALLAIADKYKGDGSVKEAETEEWRNWDVNKRLEHALVKGITTHIVEDTEESRQSFARPIEVIEGPLMS GMNIVGDLFGAGKMFLPQVVKSARVMKQAVAHLIPFIELEKGDKPEAKGKILMATVKGDVHDIGKNIVGVVLGCNGYDIVDLGVMVPAEKILQVAKEQKC DIIGLSGLITPSLDEMVHVAREMQRQDFHLPLMIGGATTSKAHTAVKIEPKYSNDAVVYVTDASRAVGVATQLLSKELKAGFVEKTRLEYIDVRERTSNR SARTERLSYAAAIAKKPQFDWASYQPVQPTFTGSKVLDNIDLKVLAEYIDWTPFFISWDLAGKFPRILEDEVVGEAATALYKDAREMLAKLIDEKLISAR AVFGFWPANQVNEDDIELYDDNGKPLARLHHLRQQIIKTDGKPNFCLADFVAPKDSEVTDYVGGFITTAGIGAEEVAKAYQDAGDDYNSIMVKALADRLA EACAEWLHQQVRKEHWGYAKDETLDNDALIKEQYRGIRPAPGYPACPDHTEKAALFTLLDPEAAEMRAGRSGVFLTEHYAMFPAAAVSGWYFAHPQAQYF AVGKIDKDQVQSYTARKGQDLSVTERWLAPNLGYDS
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site