Pseudomonas fluorescens MEP34, RU10_RS21925

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas fluorescens strain MEP34 contig_29, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
TTCGTCTGTACTAATACACAGACGTTCGTAGCAAGCTTCTTGCCTAAGCCCGGCCCTCAGCCGGGCTAATGGCATTTGCGTAAAACGCTTGATGCTTCAC CGTCGACGCCGCCGATGCGACCGAGACAAATCTGCTTCACCGCGTCAGGCCTGGCTCTTTTGCCAGCGGTGCACGTCTTTTCTGACGAGCCTTTCAAGGC TACTGACGAGCACACCCACTGATTCCTCTTACGACGATCAGCCCAAGGCACCTGCATGCGTGCCCGCTTTATTGAGCTATCCGAGGCCGACAACCGGCCG TCAGCGGATTCAGCGCAACACTTTCAAATAGTCGAAGACTGATAGGTACTAACGTCAGTGGATTTTCGGCAGATACACTTCCCGACAGCGATCACGCAGA CGACACCGGTCGAGCCGCACTTTTTGTGCGTTTCCAACAATGGCCCGCGTCCGACAGCCTGGCGCAACGGATTTATTGCAGCGCAGACGACGAGAATGCC
DNA Sequence for Gene
>RU10_RS21925
ATGGCCGGGCTGATTCCCCAGAGCTTCATTGACGACCTGCTGAACCGCACCGACATCGTCGACGTGGTCAGCTCGCGCGTGCAATTGAAGAAGGCCGGCA AGAACTACACCGCCTGCTGCCCGTTCCATAAAGAGAAAACCCCGTCATTCAGCGTCAGCCCCGACAAGCAGTTCTATTACTGCTTCGGCTGCGGCGCTGG CGGCAACGCCCTCGGCTTTCTCATGGATCACGACAACCTGGATTTCCCCCAGGCCGTCGAAGATCTGGCCAAAGCCGCCGGCATGGAAATCCCCCGCGAA GAAAGCGGCCGCGAGCGCAAGCCGCGCCAGCCGACCGATTCGCCGCTGTACCCGCTGCTCACCGCCGCCGCTGACTTCTATCGGCAGGCACTCAAGAGTC ATCCATCGCGCAAGGCCGCAGTGGACTACCTCAAGGGTCGCGGCCTGACCGGCGAGATCGCCCGGGATTTCGGCCTCGGCTTTGCGCCACCGGGCTGGGA CAATCTGCTCAAGCATCTGAGCAGCGACACCCTGCAACAGAAGGCCATGATCGAAGCCGGTCTGCTGATCGAGAACGCCGAAACCGGCAAACGCTATGAT CGCTTCCGTGATCGCGTAATGTTCCCGATCCGCGACACCCGTGGACGGATCATCGCCTTCGGCGGCCGCGTACTCGGTGACGACAAGCCCAAGTACCTGA ACTCACCGGAAACCCCGGTATTCCATAAAGGCCAGGAACTCTACGGCCTCTATGAAGCGCGCAAGAACAATCGCAACCTCGATGAAATTATCGTCGTCGA AGGCTATATGGACGTCATCGCCCTCGCCCAGCAAGGCTTGCGCAATGCCGTCGCCACGCTGGGTACCGCGACCAGTGAAGAACATTTGAAGCGCCTGTTC CGCGTCGTTCCGAACGTATTGTTCTGCTTCGACGGCGACCAGGCCGGGCGCAACGCCGCGTGGCGCGCACTGGAGGCGACCCTGCCGTGCCTGCAGGACG GTCGCCGCGCACGATTCCTGTTTCTGCCCGAAGGCGAAGACCCGGATACCCTGGTGCGCGCCGAAGGCACCGACGCTTTCAAGGCGCGCATCAATCAGCA CGCGCAGCCGCTGGCCGATTATTTTTTCCAGCAACTGACCGAAGAAGCCGATCCGCGCTCCCTCGAGGGCAAGGCGCACATGGCCACCCTCGCTGCGCCG CTGATCGACAAGGTGCCGGGCGCAAACCTGCGCATTCTCATGCGTCAGCGCCTGACCGAGATCACCGGCCTGAGCAGCGAGACCGTCAGCCAATTGGTCC AGAGTGCACCGCAGGAAGCACCGCCCGCCTATGATCCGGGCATCGATTACGACGCCATGCCGGATTACAGCGACTACCATCAGCCGCAGGCACAGGACAT GTATGTGCCGCAGCAGGAATGGACGCCGAAGAAACCCGGCGCCGGCGGCAAGAAGTGGGACAAGAAACCGTGGGACAAGAATGGCAAGCGTGGCGGCGAC CGTGAACCGCAGCGCCCGCGCACGCCGATTGGCGTTGAATCGCCAACCCTGACGGCCCTTAGAACATTGCTCCATCATCCGCAACTGGCCAAGCGCGTGG AAGACGCCGGGCACATTGCCGATGAAAATCAGACCAACGCCCAACTGCTTGTGGCGCTGCTCGAAGCCGTGCAGAAGAATCCCAAGCTAAACTCATTTCA GTTGATCGCGCGATGGCACGGTACTGAACAGGGTCGTTTGCTCAAGGCACTGGCAGAAAAGGAATGGCTGATTGACGGAGATAACCTTGAACAACAGTTT TTCGACACCATTACTAGCTTGTCAGCCCGCCAACGCGAGCGAAATCTCGAACAGTTACTCAGGAAAGCGCGGCAAAGCGAACTGAGCGTCGAAGAGAAAA ATCAACTGCGCGACCTTTTAAGTCGCAATGTTTCCGCATCAAACCCGACCTCAACTGGCGCGTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GGTCATAGCTCAGGTATAATCCTCGGCTTGTTTTTTGCCCGCCAAGACCTTCAGTGGATAGGGTGTTATGTCCGGAAAAGCGCAACAGCAGTCTCGTATT ATTGAGTTGATCAAACTGGGTCGTGAGCAGAAGTATCTGACTTACGCCGAGGTCAACGACCACCTGCCCGAGGATATTTCAGATCCGGAGCAGGTGGAAG ACATCATCCGCATGATTAACGACATGGGGATCCCCGTACACGAGAGTGCTCCGGATGCGGACGCCCTTATGTTGGCCGACGCCGATACCGACGAGGCCGC TGCGGAAGAAGCAGCCGCTGCGTTGGCGGCGGTGGAGACCGATATCGGTCGCACCACTGACCCGGTGCGCATGTACATGCGTGAAATGGGTACGGTCGAG CTTCTGACCCGTGAAGGCGAAATCGAAATCGCCAAGCGGATCGAAGAAGGCATTCGTGAAGTGATGAGCGCAATCGCGCATTTCCCTGGCACGGTTGACC
Amino Acid Sequence
>DNA primase
MAGLIPQSFIDDLLNRTDIVDVVSSRVQLKKAGKNYTACCPFHKEKTPSFSVSPDKQFYYCFGCGAGGNALGFLMDHDNLDFPQAVEDLAKAAGMEIPRE ESGRERKPRQPTDSPLYPLLTAAADFYRQALKSHPSRKAAVDYLKGRGLTGEIARDFGLGFAPPGWDNLLKHLSSDTLQQKAMIEAGLLIENAETGKRYD RFRDRVMFPIRDTRGRIIAFGGRVLGDDKPKYLNSPETPVFHKGQELYGLYEARKNNRNLDEIIVVEGYMDVIALAQQGLRNAVATLGTATSEEHLKRLF RVVPNVLFCFDGDQAGRNAAWRALEATLPCLQDGRRARFLFLPEGEDPDTLVRAEGTDAFKARINQHAQPLADYFFQQLTEEADPRSLEGKAHMATLAAP LIDKVPGANLRILMRQRLTEITGLSSETVSQLVQSAPQEAPPAYDPGIDYDAMPDYSDYHQPQAQDMYVPQQEWTPKKPGAGGKKWDKKPWDKNGKRGGD REPQRPRTPIGVESPTLTALRTLLHHPQLAKRVEDAGHIADENQTNAQLLVALLEAVQKNPKLNSFQLIARWHGTEQGRLLKALAEKEWLIDGDNLEQQF FDTITSLSARQRERNLEQLLRKARQSELSVEEKNQLRDLLSRNVSASNPTSTGA
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site