Pseudomonas fluorescens MEP34, RU10_RS21095

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas fluorescens strain MEP34 contig_28, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
AGTCGCCGATGTGCTGGTTCGGCGGCTACGAAGGCGCACCGACCAAGGCCTTCGTCGGCGACTACTACCTGAGCGGCGACACCGTCGAATGGAACCCCGA CGGCAGCATCAGCTTCGTCGGCCGCAGCGATGACGTGATCACCACCTCGGGCTACCGCGTCGGCCCGTTCGATGTGGAAAGTGCGCTGATCGAACACCCG GCCGTGGTCGAAGCGGCAGTCGTCGGCAAACCCGATCCGGAACGCACCGAACTGGTCAAAGCCTTTGTCGTGCTGAGTGCGCAGTACCGCGCCGCGCCGG GGTTGGCCGAAGAGCTGCGCCAACATGTGCGCAAGCGTCTGGCCGCGCACTCGTACCCGCGTGAAATCGAATTTGTCAGCGAATTGCCCAAGACCCCAAG TGGCAAATTGCAGCGCTTTATCTTGCGCAACCAGGAAATCGCCAAGGCTCAAGAGGCCGCGGCGCACAACGTTTCAGCTTGAATCCAAGGAAACACTGTC
DNA Sequence for Gene
>RU10_RS21095
ATGCAGATCGAGAACAAGGTTTTTATCGTCACCGGCGGCGCGTCAGGCCTCGGTGCTGCCAGCGCTGAATTGCTGGTCAGTGCCGGCGCAAAAGTCATGC TGGTCGACATGAACGCCGAAGCCGTCGCCGCTCAGGCCCAGCGCCTCGGTGCGCAGAGCGTCGTCGCCGATATCAGCAACGAAGCCGCCGCCGAAGCTGC TGTGCAGGCGACCATCGCCGCATTCGGCAGCCTCAACGGCCTGATCAACTGCGCCGGCATCGTTCGCGGCGAGAAGATCCTCGGCAAGAACGGCCCGCAC GCCCTGAGCAGTTTTGCCCAAGTGATCAACGTCAACCTGATCGGCAGCTTCAACATGCTGCGTCTGGCCGCGGCGGCCATTGCCGAGAGCGAAGCCAATG CTGACGGCGAGCGGGGGGTGATCATCAACACTGCCTCGGTCGCAGCATTCGATGGCCAGATCGGCCAGGCTGCGTACTCGGCGTCGAAAGGTGCGATCGC CAGCCTGACCCTGCCCGCCGCCCGCGAACTGGCGCGCTTCGGCATCCGCGTGATGACCATCGCCCCGGGCATCTTCGAAACGCCAATGATGGCCGGCATG ACCCCGGAAGTGCGCGACTCATTGGCCGCGGGCGTGCCGTTTCCGCCGCGTCTGGGCAAGCCCGCCGAATACGCCGCGCTGGTACGCCACATCATTGAAA ACAGCATGCTCAACGGTGAGGTGATCCGTCTCGACGGCGCCTTGCGTATGGCCGCCAAGTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
AGAGGAATCCGTCATGACTATGTCCAACGATCCGATTGTTATCGTCAGCGCCGTCCGCACACCGATGGGCGGTTTTCAGGGCGAACTGAAAAGCCTCAGC GCACCGCAACTTGGCGCGGCGGCAATCAAGGCGGCGGTCGAACGCGCCGGTGTCGCCAGTGACGCGGTTGATGAAGTGCTGTTCGGCTGCGTACTGCCGG CGGGCCTCGGCCAAGCGCCGGCACGCCAGGCTGCGCTGGGCGCCGGGCTGGATAAATCGACGCGCTGCACCACGGTCAACAAGATGTGCGGCTCGGGCAT GCAGACCACCATCATGGCCCACGACATGCTGCTCGCTGGCAGTGCCGATGTGGTGATTGCCGGTGGCATGGAAAGCATGTCCAACTCGCCGTACCTGCTC GATCGTGCCCGCGCCGGTTATCGCATGGGCCATGGCCGCGTGCTCGATTCGATGTTCCTCGACGGCCTCGAAGACGCCTACGACAAGGGCCGGCTGATGG
Amino Acid Sequence
>3-hydroxy-2-methylbutyryl-CoA dehydrogenase
MQIENKVFIVTGGASGLGAASAELLVSAGAKVMLVDMNAEAVAAQAQRLGAQSVVADISNEAAAEAAVQATIAAFGSLNGLINCAGIVRGEKILGKNGPH ALSSFAQVINVNLIGSFNMLRLAAAAIAESEANADGERGVIINTASVAAFDGQIGQAAYSASKGAIASLTLPAARELARFGIRVMTIAPGIFETPMMAGM TPEVRDSLAAGVPFPPRLGKPAEYAALVRHIIENSMLNGEVIRLDGALRMAAK
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site