Pseudomonas fluorescens MEP34, RU10_RS19860

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas fluorescens strain MEP34 contig_25, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GCGAACCAGGCCGCCGGCGATCAGCAGCGGCGCTTCGAGTTCGCGCTGGATCTGGCTGACCTGAGTCTGGGCCAACGAGGTCAGGCGCTGCTCGATCACT TGCTCGAACTGCGCCTGGGTGCGCTGTTGCACCATTTCTTGAGTGCGAGCGCCGGAGAACAGTGCATACAGCACCAGCGCCGCGACCACGCTGAGAACGA TGGCGCCGGCCAGGGCGGCGACGGAAAACTGGATCGACTTGAACTTCATGGGAGCTCCGCACGCAAGAGGACAATCTGCGAGGGATTTATCGGCGGCGCG TGCAGGGCCATGAGAGACGTTGGTCGGAATCGCCGCGCGATGTCGTGGATGGATCGGTGCACGGCGGATTCAATGTGCGTTGAGGAATTTTCACCGCGTC TTGCGGCCATAGGTGAATGTACGCGCAATGCGTCCGGTGTATCTGGCGCCGATACCATTAGCCGCCTAGGATACGCCTCAGGTTTTCAGGGAGTTTTTGA
DNA Sequence for Gene
>RU10_RS19860
ATGAACAAGACATTGGTTACAAGTGCACTGAGCGCAGCGCTGTTGCTGGCCGGTTGTCAGTCGGTCAACACCACCAGCGGCGGTGCCGTGGGCGTGGAGC GCAAGCAGTACATGTTCAGCATGCTGTCCTCGCAAGAGGTCGACCAGATGTACGCGCAGTCGTATCAGAAGACCGTCGGCGAGGCGTCGAGCAAAGGTGT GCTGGACAAGACCAGCCCGGAAGCCAAGCGCGTGCAGACCATCGCCAACCGGCTGATCGCCCAGGCACCGACCTTCCGCCCGGACGCGGCGCAGTGGCAG TGGGAAGTCAATCTGATCAAGAGCGATGAGCTCAACGCCAACTGCGGTCCCGGCGGCAAGATCATTTTCTACACCGGGCTGATCGACAGCCTGAAACTCA CCGACGACGAAATTGCCGCGGTCATGGGCCATGAAATCGCCCACGCCCTGCGCGAGCACGGTCGTGAAGCGATGTCCAAGGCTTATGGCATGGAGATGGC GAAGCAGGGCGCTGGTGCCTTGTTCGGGCTGGGTCAGGACAGCCTGGCGCTGGCCGACACCGTGGCCAACTACGGCATGACCTTGCCCAACAGCCGCGCC AACGAAAACGAAGCCGACCTGATCGGCCTGGAACTGGCCGCCCGCGCCGGCTACAACCCGAACGCGGCGATCACCCTGTGGGACAAGATGAGCAAGGCTT CCGAGGGCGCGCCACCGGAATTCATGAGCACTCACCCGGCATCGAGCAGTCGCATTGCGGCGTTGCAGGCAGCCATTCCGAAAGTGATGCCGCTGTACGA AAAAGCCCCAAAATCCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
ATAAGCAGCTGCAAGCTTCAAGTGGCAAGCTGCAAGTCAAAGCAGGTCCGCTTGGCTTGCAGCTTTTTCTTGAAGCTTGCAGCTAGAAGCTTGCAGCTGC TTCAAACCCATCCACTACTCTGCATGGCCTTGTACACCGCAACAATCGCCAGAATCATGAACGCCGAAGCCGCGAGGCGGCGGATCAGGGTCAGTGGCAG TTTGTCCGCGGCGAAATTACCCGCCAGTACCACCGGCACGTTGGCAATCAACATGCCCACGGTAGTGCCGATGATCACCAGCCACAGTTCCGGGTATTGC GCGGCGAGCATCACGGTGGCGATCTGCGTCTTGTCGCCGATCTCGGCGAGGAAGAACGCAATCAGGGTCGTCAGGAACGGCCCGAACTTGCGCGCCGTGC TGGCTTCGTCGTCATCCATCTTGTCCGGGACCAGAGTCCACAGTGCTGTGGCCGCGAAGCTGGCGGCGAGGATCCAGTGCAGCACGGCGTCGGAGAAGAA
Amino Acid Sequence
>peptidase M48
MNKTLVTSALSAALLLAGCQSVNTTSGGAVGVERKQYMFSMLSSQEVDQMYAQSYQKTVGEASSKGVLDKTSPEAKRVQTIANRLIAQAPTFRPDAAQWQ WEVNLIKSDELNANCGPGGKIIFYTGLIDSLKLTDDEIAAVMGHEIAHALREHGREAMSKAYGMEMAKQGAGALFGLGQDSLALADTVANYGMTLPNSRA NENEADLIGLELAARAGYNPNAAITLWDKMSKASEGAPPEFMSTHPASSSRIAALQAAIPKVMPLYEKAPKS
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site