Pseudomonas fluorescens MEP34, RU10_RS19810
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas fluorescens strain MEP34 contig_25, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GCTTTTCGCGAATCTGCAGAGCTGTCATTCGCTCGGCCACCGCGTTGTTTTGCCCTTGCGGGCAGGTGCCAGGCCAAGGCAGCCCTTTTTGAGGTTCACG TCTTCAAAAGAGCGTGAAAAAAACGGGTTTTCACAACTTCACAAGAGTGTGGCGAGCAAATGAATAGTTTTGCGTCTGAACATGCACCATTAGCGTCTGA AACAGCCCAACGACACAGGACCGGGTATACCTCGAATACCGGAGTCTGAAGCCTGTCCGCTACGGATTTGGTTGCACGAAAACGGATGTCTCGACCATAA GTCGAATTGCTAGCCCCGGGCGAAAATGCGTTCATGGAACGCTTGAAACCAGGCCGCACGCATCCGTCGAAGTTGCGAAAAATTGCGAAGATTCGGACAT GGCCAACCTGACCACGGATAGCCCGGGCCCACTGACCTGCCCTGGAACGCCTGGCAGCCATGCCGACAATTTGGTGCTGCAGATTTGGGAGACGCGTTAA
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| DNA Sequence for Gene |
>RU10_RS19810
ATGGCGCATAACGAAGCAGTCGACGTAGTTCTGGTAGGGGCCGGCATCATGAGTGCCACCCTGGCCGTGCTGCTCAAAGAGCTCGACCCCGCGATCAAGC TGGAAGTCGTCGAGCTGATGGATTCCGGTGCTGCCGAGAGTTCCAATCCGTGGAACAACGCCGGTACCGGCCACGCCGGCCTGTGCGAGCTGAACTACAC GCCACAGGCCGCCGACGGCAGCGTCGACATCAAGAAAGCCGTGCACATCAACACCCAGTTCGAGGTGTCGAAGCAGTTCTGGTCGTACCTGACCAAAAAA GGCACGTTCGGCTCGTGCAAATCCTTCATCAGCCCGGTGCCGCACCTGAGTTTCGTTCAGGGCGAGAGCGGTGTGTCGTTCCTCAAGGAACGCTTCAATG TCCTGAGCAAGCACCACGCGTTTGCCGACATGGAGTACACCGAAGACAAAGGCAAGATGGCCGAGTGGATGCCGCTGATGATGCCGGGCCGCTCGCCGGA CGAAGTCCTCGCCGCGACCCGCGTGATGAACGGCACCGACGTCAACTTCGGCGCCCTGACCAATCAGTTGCTCAAGCACCTGAGCAGCGCCCCGGACACT CAGGTCAAATACTGCAAGCGCGTGACCGGGCTCAAGCGTAACGGCGCCGGCTGGACCGTCAGCATCAAGGACGTCAACAACGGCAACACTCGCGAAGTCG ACGCCAGGTTTGTCTTCCTCGGCGCCGGTGGCGCGGCCCTGCCGTTGCTGCAGGCTTCGGGCATCGAAGAAAGCAAAGGCTTCGGCGGCTTCCCGATCAG CGGCCAGTGGCTGCGTTGCGATAACCCGGAAGTGGTCAAGCACCACCAGGCCAAGGTCTACAGCCAGGCGGCCGTGGGTTCGCCACCGATGTCGGTGCCG CACCTCGACACCCGCGTCGTCGACGGCAAGAAATCCCTGCTGTTCGGGCCATACGCCGGTTTCACCACCAAGTTCCTCAAGCACGGCTCCTTCATGGACC TGCCGATGTCGGTGCGCGCCGGCAACATCGGGCCGATGCTGGCGGTGGCAAAAAACAACATGGACCTGACCAAGTACCTGGTCAGCGAAGTGATGCAGTC GATGGAGCAGCGCCTGGAATCCCTGCGCCGCTTCTACCCGCAGGCGAAAGCCGAAGACTGGCGCCTGGAAGTGGCCGGTCAACGGGTGCAGATCATCAAG AAGGACCCGAAAAAGGGTGGCATTCTGCAGTTCGGTACCGAACTGGTCGCGGCGAAAGACGGCTCCCTCGCCGCCCTGCTTGGCGCATCGCCAGGCGCGT CGGTGACCGTTTCGATCATGCTCGAGCTGATCGAGAAATGCTTCCCGGGCAAGGCGTCCGGCGAGTGGGCCGCTAAACTGGCAGAAATCTTCCCGGCCCG TGAAAAGGTTCTGGAAACCGATGCTGCGCTGTATCGCAAGATCAACACGCAGAACAACATCGCCCTGGAACTGGTTGAGGAAAGCAGCGAGACGCCAAGC TTTGCTTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TCTCCTTGCATAAAAAAACGCCCCATTCGGGGCGTTTTTTTTGCCTGCCAGAATCAAAAGATCGCAGCCTTCGGCAGCTCCTACAGGGTATACATCAATC CCGTGTAGGAGCTGCCGAAGGCTGCGATCTTTTGATCTTGTCTTTTGACCTTAACCGCGCGCCTTCTCGATCAACTCGATGTACTCGGCGGCATTACGCT GATCCTTGATGTGATCAACAAAAGTCTGGCCCTGCTCGTCCTTGCCATCAACGTCATAACCGGCCGCGACGAAGAAGCCCAGAAAACGCTCGAAATCATC GATACGCAGGCCGCGATAGGCCTTGATCAGTTTGTGCAGCGACGGCGAAGTGGCGTCGACCGGTTCAAAATCGAGGAACAGCTTGATCTGCTCATCGCCG ATCTCGTCACCAATCACTTGTTTCTTATCTTTACGCATTGCCGACTCCAGCTCGCAGACATGACACGGGGCGGGCAGTTTACCCCTGCCCGACCGCCCGG
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| Amino Acid Sequence |
>malate:quinone oxidoreductase
MAHNEAVDVVLVGAGIMSATLAVLLKELDPAIKLEVVELMDSGAAESSNPWNNAGTGHAGLCELNYTPQAADGSVDIKKAVHINTQFEVSKQFWSYLTKK GTFGSCKSFISPVPHLSFVQGESGVSFLKERFNVLSKHHAFADMEYTEDKGKMAEWMPLMMPGRSPDEVLAATRVMNGTDVNFGALTNQLLKHLSSAPDT QVKYCKRVTGLKRNGAGWTVSIKDVNNGNTREVDARFVFLGAGGAALPLLQASGIEESKGFGGFPISGQWLRCDNPEVVKHHQAKVYSQAAVGSPPMSVP HLDTRVVDGKKSLLFGPYAGFTTKFLKHGSFMDLPMSVRAGNIGPMLAVAKNNMDLTKYLVSEVMQSMEQRLESLRRFYPQAKAEDWRLEVAGQRVQIIK KDPKKGGILQFGTELVAAKDGSLAALLGASPGASVTVSIMLELIEKCFPGKASGEWAAKLAEIFPAREKVLETDAALYRKINTQNNIALELVEESSETPS FA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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