Pseudomonas fluorescens MEP34, RU10_RS18850

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas fluorescens strain MEP34 contig_24, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GGCCGGGCAGCGTTTTCTGGAGATCTGGTCGGGTTTGCCGGTGCTGTATCTGCTGATCATTCTCGCCAGTTTCGTCCAGCCGAATTTCTGGTGGCTGCTG GGGATCATGCTGCTGTTCTCGTGGATGAGCCTGGTCGACGTGGTGCGCGCCGAGTTCCTGCGCGGGCGCAATCTGGAGTACGTGCGCGCCGCGCGGGCGC TGGGCATGCAGAACGGCGCGATCATGTTCCGCCACATCCTGCCCAACGCCATGGTCTCGACCATGACCTTCATGCCGTTCATTCTCACCGGCGCTATCGG CACCCTCACCGCGCTGGATTTCCTCGGTTTCGGCTTGCCGGCGGGCAGCCCGTCGCTGGGCGAACTGGTCGCCCAGGGCAAATCCAACCTGCAGGCGCCG TGGCTGGGCATGAGCGCGTTTGCCGTGCTGGCATTGATGTTGAGTTTGCTGGTGTTCATCGGCGAGTCTGCTCGCGATGCCTTCGACCCGAGGAAGTGAA
DNA Sequence for Gene
>RU10_RS18850
ATGAATCAGGACAATCTGATCGAAGTGCGCGACCTCGCCGTCGAATTCGGTTTCGGCGAGCGGGTGCATCGTGTGGTCGAGGGCGTGAGCTTCGACATCA AGCGTGGCGAAACCCTGGCGCTGGTCGGCGAATCGGGCTCGGGCAAATCGGTAACGGCACACTCGATCCTGCGCCTGCTGCCCTACCCCATGGCGCGGCA TCCGGCCGGCAGCATCAACTATGCCGGGCAGAACCTGCTGGATCTGAGCGAAAAGACCATCCGCCATATTCGTGGCAACCGCATCGCGATGATTTTTCAG GAACCGATGACCTCGCTGAATCCGCTGCACTCGATCGAGAAGCAGATCAACGAGATTCTCGGCATTCACAAGGGCCTGAGCGGCAAAGTTGCGACCAGAC GCACCCTTGAGCTGCTGGAAATGGTCGGCATTCCCGAGCCGCACAAGCGCCTCAAGGCCCTGCCCCATGAATTGTCCGGCGGCCAGCGCCAGCGCGTGAT GATCGCCATGGCCCTGGCCAATGAGCCGGAATTGCTGATTGCCGACGAACCGACCACCGCGCTGGACGTGACCGTTCAGCTGAAAATCCTCGATTTGCTC AAGGATCTTCAGGCTCGATTGGGCATGTCGCTGCTCCTGATCAGTCACGATTTGAATCTGGTGCGAAGAATTGCGCATCGCGTATGTGTCATGCAGCGCG GTTGCATCGTCGAACAGGCATCGTGCGCAGAGCTGTTCCGTTCGCCGCAGCATCCGTACACTCGGGAATTGCTCGGCGCGGAGCCCAGCGGCGGCCCGGC AACCAATGCAATCGGTGCGCCGCTGCTCGAAGTCGAGGACCTGAAAGTCTGGTTCCCGATCAAGAAAGGCCTGCTCAAGCGCACGGTGGATTACGTCAAG GCAGTGGACGGCATCAATTTCAGCCTGCCTCAGGGTCAGACCCTGGGGATTGTCGGCGAAAGCGGTTCCGGCAAATCCACCCTCGGTCTGGCAATTTTGC GCCTGATCGGCAGCCAGGGCGCGATCCGCTTTGAAGGCAAGCAGCTAGACTGCCTGACGCAAAGCGAGGTTCGTCCGCTGCGCCGGGAAATGCAGGTGGT GTTTCAGGACCCGTTTGGCAGCCTGAGCCCACGCATGTGCGTCAATGACATCGTTGGCGAAGGCCTGCGGATACACAAGATGGGCACCGCCGCCGAACAG GAAGCGGCGATCATCGCGGCATTGAAGGAGGTAGGTCTGGATCCGGAAACCCGGCACCGCTACCCCCACGAATTTTCCGGTGGGCAACGGCAGCGAATCG CCATTGCCCGGGCTTTGGTGCTGAAACCGGCGCTGATCCTGCTGGACGAGCCGACTTCGGCGCTCGACCGGACGGTGCAGCGGCAAGTGGTGGAGCTGTT GCGTTCACTGCAAGCCAAGTACAACCTGACGTATTTGTTCATCAGCCATGATCTGGCTGTCGTCAAAGCGCTGAGCCACCAACTGATGGTGGTCAAGCAT GGCCAAGTGGTCGAACAGGGAGACGCGCAAAGTATCTTTGCCGCCCCCCGACATCCGTATACACAGCAGTTGCTGGAAGCCGCTTTTCTGGCACCAGCCA CTGCGCAATAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CCTGAAAGAGGAGCAACACATGGGTTTTCTCGCCGGTAAGCGCGTACTGATCGTCGGTGTCGCCAGCAAGCTGTCCATCGCATCCGGCATCGCTGCCGCC ATGCATCGCGAGGGCGCTGAGCTTGCCTTCACTTATCAGAACGACAAACTCAAGGGTCGCGTCGAAGAATTCGCACAAGGCTGGGGTTCGAGCCCTGAGC TGTGCTTCCCGTGCGACGTGGCCAGCGATGAAGAAATCGCCAAGGTCTTCGAAGAACTGAGCAAGAAGTGGGACGGCCTGGACTGCATCGTGCATTCCGT CGGCTTCGCACCGGGCGACCAACTGGACGGCGACTTCACCGAAGCCACCACCCGTGAAGGTTTCCGCATCGCTCACGACATCAGCGCCTACAGCTTCGTG GCGCTGGCCAAGGCCGGTCGCGAAATGATGAAAGGCCGCAACGGCAGCCTGCTGACCCTGTCCTACCTGGGCGCCGAGCGCACCATGCCGAACTACAACG
Amino Acid Sequence
>microcin ABC transporter ATP-binding protein
MNQDNLIEVRDLAVEFGFGERVHRVVEGVSFDIKRGETLALVGESGSGKSVTAHSILRLLPYPMARHPAGSINYAGQNLLDLSEKTIRHIRGNRIAMIFQ EPMTSLNPLHSIEKQINEILGIHKGLSGKVATRRTLELLEMVGIPEPHKRLKALPHELSGGQRQRVMIAMALANEPELLIADEPTTALDVTVQLKILDLL KDLQARLGMSLLLISHDLNLVRRIAHRVCVMQRGCIVEQASCAELFRSPQHPYTRELLGAEPSGGPATNAIGAPLLEVEDLKVWFPIKKGLLKRTVDYVK AVDGINFSLPQGQTLGIVGESGSGKSTLGLAILRLIGSQGAIRFEGKQLDCLTQSEVRPLRREMQVVFQDPFGSLSPRMCVNDIVGEGLRIHKMGTAAEQ EAAIIAALKEVGLDPETRHRYPHEFSGGQRQRIAIARALVLKPALILLDEPTSALDRTVQRQVVELLRSLQAKYNLTYLFISHDLAVVKALSHQLMVVKH GQVVEQGDAQSIFAAPRHPYTQQLLEAAFLAPATAQ
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site