Pseudomonas fluorescens MEP34, RU10_RS16595

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas fluorescens strain MEP34 contig_23, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GTGCCAAAGGCCCTGCTGTCCAACGAAGTTGACCGTCTGCGCGTGCAGGCTGTTCAGCAGTTCGGTGGCAACATCAAGCCAGACCAGCTGCCGGCCGAGC TGTTCGAAGAGCAAGCCAAGCGTCGCGTCGTGCTGGGCCTGATCGTCGCTGAAGTGGTCAAGCAGTTCGATCTGAAGCCTGACGAAGCTCGCGTTCGCGA AATGATTCAGGAAATGGCTTCCGCTTACCAGGAGCCAGAGCAGGTCGTGTCGTGGTACTACAAAAACGAGCAGCAACTGAACGAAGTGCGTTCGGTTGTG CTGGAAGAACAAGTTGTGGATACTGTTCTGCAGAAAGCTAGTGTGACCGACAAATCGGTCTCCTACGAAGAAGCAGTCAAGCCGGTAGAAGCTCCAGCAG CCGACTGATTGATTTTGCGTTAGAAGTGCACACCATAAGCCAGCTCTCGAGCTGGCTTATGCGTATTCAAGACATAACTATTTGGGAGCGACTGCAGAGC
DNA Sequence for Gene
>RU10_RS16595
ATGTTCCGTAATTCTTATATTCAGCAGAACTCTGATATCCAGGCCGCCGGCGGCCTGGTCCCGATGGTTGTCGAGCAGTCCGCTCGTGGCGAACGCGCCT ACGACATCTACTCGCGCCTGCTCAAGGAGCGAGTGATCTTTCTGGTGGGCCCGGTAGAGGACTACATGGCCAACCTGATCTGTGCGCAACTGCTGTTCCT TGAAGCGGAAAACCCGGACAAGGACATCCATCTCTACATCAACTCGCCGGGCGGTTCGGTGACTGCAGGCATGTCGATCTACGACACCATGCAGTTCATC AAGCCGAACGTATCGACCACCTGCATCGGTCAGGCCTGCAGCATGGGCGCATTCCTGCTCACCGCAGGTGCTCCGGGCAAGCGTTTCTGCCTGCCGAACT CGCGCGTGATGATTCACCAGCCACTGGGTGGTTTCCAGGGCCAGGCGTCGGACATCGAAATCCACGCCAAGGAAATCCTCTTCATCCGCGAGCGTCTGAA CATGCTGATGGCCAAGCACAGCGGCCGTACTCTGGAAGAAATCGAGCGCGATACGAATCGCGACAACTTCATGAGTGCCGAAGCTGCGAAGGAATACGGC CTGATCGATGAAGTGATCAACCAGCGTCCAGCTTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TATAAGCAGCGCAAAACAGGCCTGATCGGCATGTCCGATCAGCGGCGGGCTTGAAAAAGCCCGCAATAGCCTTCATCTTGTGTTGCAAGCCTATCGGATT TGGATCGAACGAATGACTGACACCCGCAACGGCGAGGACAACGGCAAGCTGCTCTATTGCTCCTTCTGTGGCAAAAGCCAGCATGAAGTGCGCAAATTGA TTGCCGGCCCCTCGGTCTTTATCTGCGACGAGTGCGTCGACCTGTGCAATGACATCATCCGCGAGGAGGTGCAGGAAGCACAGGCCGAAAGCAGCGCGCA TAAATTGCCTTCGCCTAAAGAAATCAGCGGCATCCTTGACCAGTACGTCATTGGTCAGGAGCGTGCGAAAAAGGTTTTGGCCGTAGCGGTGTACAACCAC TACAAGCGCCTGAACCAGCGTGACAAAAAGGCTGACGACGTCGAACTCGGCAAGAGCAATATCCTGCTGATCGGCCCGACAGGCTCTGGTAAAACCCTGC
Amino Acid Sequence
>ATP-dependent Clp protease proteolytic subunit
MFRNSYIQQNSDIQAAGGLVPMVVEQSARGERAYDIYSRLLKERVIFLVGPVEDYMANLICAQLLFLEAENPDKDIHLYINSPGGSVTAGMSIYDTMQFI KPNVSTTCIGQACSMGAFLLTAGAPGKRFCLPNSRVMIHQPLGGFQGQASDIEIHAKEILFIRERLNMLMAKHSGRTLEEIERDTNRDNFMSAEAAKEYG LIDEVINQRPA
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site