Pseudomonas fluorescens MEP34, RU10_RS15290

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas fluorescens strain MEP34 contig_20, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
TATTACTTCATCTACGCGGTGTTGTTCTTGGTGGTACTGGCGGTGCTGTACGTCAAGCATCGTCTGGTGAAAATGCCGGTTGGTCGCGCCTGGGAAGCCC TGCGTGAAGATGAAATCGCCTGCCGCTCGATGGGCCTCAACCACGTGCTGGTCAAGCTCTCGGCGTTCACCATCGGTGCATCGACGGCGGGTCTGGCCGG GGTGTTCTTCGCCACCTATCAAGGCTTCGTCAACCCGACCTCGTTCACCTTCTTCGAATCGGCGCTGATCCTCGCCATCGTCGTGCTCGGCGGCATGGGC TCGACCATCGGCGTAGTCATCGCTGCGTTCGTACTCACCGTCGCCCCGGAACTGCTGCGCGGTTTCGCTGAGTATCGAGTGCTGCTGTTCGGCATCCTGA TGGTGTTGATGATGATCTGGCGACCACGCGGGCTGATCCGCATCAGCCGCACCGGGGTCAAACCACGCAAAGGTGCCATTCACTACGAGAGGACTGCGCC
DNA Sequence for Gene
>RU10_RS15290
ATGAGTGAAGTCGTACTCTCTGTTGAAAAACTGATGATGCATTTCGGTGGCATCAAGGCTTTGAGCGATGTCAGCCTGAAGGTCAAACGCAATTCGATCT TCGCCCTGATCGGCCCCAACGGCGCTGGCAAGACCACAGTGTTCAACTGCCTGACCGGGTTCTACAAGGCCTCTGGCGGCAAGATCGAACTCAACGTGCG TGGCCAGCAGACCAACGTCATCCAGCTGCTGGGCGAGTCGTTCAAAGCGACCGATTTCGTCTCGCCGAAATCCTTCCTCAGCCGCATGTACTACAAAATG TTCGGCGGGACTCACCTGGTGAACCGTGCAGGTCTGGCCCGGACGTTCCAGAACATTCGCCTGTTCAAGGAAATGTCGGTGCTGGAAAACCTGCTGGTGG CGCAGCACATGTGGGTCAATCGCAACATGCTCGCCGGCATCCTCAACACCAAGGGCTATCGCAAGGCCGAGAGCGATGCGCTGGATGTCGCCTTCTACTG GCTGGAAGTGGTCGATCTGGTCGACTGCGCCAACCGTCTCGCCGGTGAGCTGTCCTACGGTCAGCAACGGCGTCTGGAAATTGCCCGGGCCATGTGCACG CGGCCGCAGATCATCTGCCTCGACGAACCGGCCGCCGGCCTCAACCCTCAGGAAACCGAAGCGCTGAGCGCGATGATCCGGCTGCTGCGCGACGAGCACG ATCTGACCGTGGTGCTGATCGAACACGACATGGGCATGGTCATGAGCATTTCCGATCACATCGTGGTCCTCGACCACGGCATCGTTATCGCCGAAGGCGG ACCGGAAGCGATCCGCAGCGATCCGAAAGTGATTGCAGCCTACCTGGGCGCCGACGAAGAGGAGCTGGTATGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GCCAACCGATCCTCGAATTGCGCAATCTGGACGTGTTCTACGGCCCGATCCAGGCGCTCAAAGGCGTTTCGCTGCAGATCAACGAAGGCGAGACCGTCAG CCTGATCGGCTCCAACGGCGCCGGCAAGTCGACCCTGCTGATGTCGATCTTCGGTCAGCCCAGAGCGGCGGGCGGGCAGATTCTTTATCAAGGCGTCGAC ATTACCCACAAGTCCTCGCATTACATCGCCTCCAACGGCATCGCGCAGTCGCCGGAAGGACGGCGGGTGTTCCCCGACATGACCGTCGAGGAAAACCTGC TGATGGGCACCATCCCGATTGGCGACAAGTACGCCAAAGAGGACATGCAGCGCATGTTCGAGCTGTTCCCGCGGCTTGAAGAACGACGCAATCAGCGCGC GATGACCATGTCGGGCGGTGAGCAGCAGATGCTCGCCATCGCCCGTGCGCTGATGAGCCGGCCGAAATTGTTGCTGCTCGATGAACCGAGCCTGGGACTG
Amino Acid Sequence
>ABC transporter
MSEVVLSVEKLMMHFGGIKALSDVSLKVKRNSIFALIGPNGAGKTTVFNCLTGFYKASGGKIELNVRGQQTNVIQLLGESFKATDFVSPKSFLSRMYYKM FGGTHLVNRAGLARTFQNIRLFKEMSVLENLLVAQHMWVNRNMLAGILNTKGYRKAESDALDVAFYWLEVVDLVDCANRLAGELSYGQQRRLEIARAMCT RPQIICLDEPAAGLNPQETEALSAMIRLLRDEHDLTVVLIEHDMGMVMSISDHIVVLDHGIVIAEGGPEAIRSDPKVIAAYLGADEEELV
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site