Pseudomonas fluorescens MEP34, RU10_RS14685 (carB)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas fluorescens strain MEP34 contig_19, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GATCAAGGAAGTGCTGGAAACCGAGACGCCGGTGTTCGGCATCTGCCTCGGCCACCAGCTGCTGGCTCTGGCCTCCGGCGCCAAGACCCTGAAAATGGGC CACGGCCACCACGGTGCCAACCACCCGGTGCAGGATCTGGACACCGGCGTTGTGATGATCACCAGCCAGAACCACGGTTTTGCGGTAGACGAAGCCACCC TGCCAGCCAACGTGCGCGCGATCCACAAGTCGCTGTTCGACGGCACCCTGCAAGGCATCGAGCGCACCGACAAGAGCGCGTTCAGCTTCCAGGGTCACCC TGAAGCGAGCCCGGGCCCGAACGATGTCGCGCCACTGTTCGACCGCTTCATCAACGAGATGGCCAAGCGACGCTAAGCGTTCGCCTTGAGACTGTAGAGA GAAGCCTTGAGGGCGGCCCCGGCACCCGGCGGCCCCTTCGGGACTTCAGAAATCGATCAAGACGGCTTGCCGACTGACCTGCGGATTTGAGTGACAAACC
DNA Sequence for Gene
>RU10_RS14685 |carB
ATGCCAAAACGTACAGACATTAAAAGCATCCTGATTCTCGGCGCTGGCCCGATCGTGATCGGCCAGGCCTGCGAATTCGACTACTCCGGCGCCCAGGCCT GCAAAGCCCTGCGCGAAGAGGGCTACCGCGTCATCCTGGTGAACTCCAACCCGGCCACCATCATGACCGACCCGGACATGGCCGACGCTACCTACATCGA ACCGATCAAGTGGCAGACCGTTGCCAAGATCATCGAGAAGGAGCGTCCGGACGCCGTACTGCCAACCATGGGCGGCCAGACTGCACTGAACTGCGCCCTG GACTTGGAGCGCGAAGGCGTTCTGGAGAAGTTCGGCGTAGAGATGATCGGTGCCAACGCCGACACCATCGACAAGGCTGAAGACCGTTCGCGTTTCGACA AGGCGATGAAATCCATCGGCCTGGCGTGCCCGCGTTCCGGCATCGCCCACAGCATGGAAGAGGCCAATGCGGTCCTCGAAACCCTGGGCTTCCCGTGCAT CATCCGTCCGTCCTTCACCATGGGTGGCACCGGTGGCGGTATCGCTTACAACCGTGAAGAGTTCGAAGAAATCTGCGCCCGTGGTCTGGACCTGTCGCCG ACCAAAGAGCTGCTGATCGACGAATCGCTGATCGGCTGGAAAGAATATGAAATGGAAGTTGTCCGCGACAAAAAGGACAACTGCATCATCGTCTGCTCGA TCGAAAACTTCGACCCGATGGGCGTGCACACCGGTGACTCGATCACCGTGGCTCCGGCCCAGACCCTCACCGACAAGGAATACCAGATTCTGCGTAACGC CTCGCTGGCGGTCCTGCGCGAGATCGGCGTCGAGACTGGCGGCTCCAACGTGCAGTTCGGTATCTGCCCGAACACTGGCCGTATGGTAGTGATCGAAATG AACCCGCGTGTATCGCGTTCCTCGGCACTGGCTTCGAAAGCCACCGGTTTCCCGATCGCCAAGGTCGCGGCCAAACTGGCTGTGGGTTACACCCTCGACG AGCTGTCGAACGACATCACCGGCGGCAAGACCCCGGCGTCCTTCGAACCGTCGATCGACTACGTCGTGACCAAGCTGCCACGCTTCGCCTTCGAGAAATT CGCCAAGGCTGACGCGCGCCTGACCACGCAAATGAAGTCGGTCGGTGAAGTCATGGCCATCGGCCGCACCTTCCAGGAATCCCTGCAGAAAGCCCTGCGT GGTCTGGAAGTCGGCGTTTGCGGTCTGGACGAGAAGCTTGATCTGAGCAACCCGGAAAGCATGAGCGTGCTCAAGCGCGAACTGACCGTGCCGGGCGCCG AGCGTATCTGGTACGTAGCGGACGCCTTCCGCGCCGGTCTGTCGGTCGAAGACATCTTCGGCATGAACATGATCGACCCGTGGTTCCTGGTGCAGATCGA GGACCTGATCAAGGACGAAGAGAAGGTCAAGACCCTCGGTCTGTCCTCGATCGACCGCGACCTGATGTTCAAGCTCAAGCGCAAAGGCTTCTCCGATCAG CGTCTGGCCAAGCTGCTGGGCGTCACCGAGAAGAACCTGCGCACCCATCGTCAGAAGCTCGAAGTATTCCCGGTCTACAAGCGCGTTGACACCTGCGCTG CCGAGTTTGCCACCGACACCGCTTACCTGTACTCGACTTACGAGGAAGAGTGCGAAGCCGCGCCGTCGGGTCGCGACAAGATCATGATCCTGGGTGGCGG TCCGAACCGTATCGGCCAGGGCATCGAGTTCGACTACTGCTGCGTTCACGCTGCTCTCGCTCTGCGCGAAGACGGCTACGAAACCATCATGGTCAACTGC AACCCGGAAACCGTTTCCACTGACTACGACACTTCCGACCGTCTGTACTTCGAACCGGTAACTCTGGAAGACGTGCTGGAAATCTGCCGCGTCGAGAAGC CGAAGGGCGTGATCGTCCAGTACGGCGGCCAGACTCCGCTGAAACTGGCTCGCGCGCTGGAAGCCGCTGGTGTGCCGATCATCGGCACCAGCCCTGACGC CATCGACCGTGCCGAAGACCGCGAGCGCTTCCAGCAAATGGTCGAGCGCCTGAACCTGCGTCAGCCGCCAAACGCCACCGTGCGCAGCGAAGACGAAGCC GTTCGTGCTGCCGCGAAAATCGGTTATCCGTTGGTGGTGCGCCCGTCGTATGTCCTGGGCGGCCGTGCGATGGAAATCGTTTACAAGGAAGACGAGCTCA AGCGTTACCTGCGTGACGCGGTGCAAGTGTCCAACGACAGCCCGGTGCTGCTCGACCACTTCCTCAACTGCGCCATCGAAATGGACGTGGACGCGGTTTG CGACGGCAAAGACGTGGTAATCGGCGCGATCATGCAGCACATCGAACAGGCGGGCGTTCACTCCGGTGACTCCGCATGCTCGCTGCCGCCGTACTCGCTG CCGGCGCACATCCAGGACGAGATGCGCGAACAGGTCAAGAAAATGGCCCTTGAACTGGGCGTTGTCGGCCTGATGAACGTGCAATTGGCTTTGCAGGGCG AAGACATCTACGTCATCGAAGTCAACCCGCGCGCCTCGCGTACCGTGCCGTTCGTTTCCAAGTGCATCGGTGTTTCCCTGGCGATGATCGCAGCGCGCGT GATGGCCGGTAAGACCCTGAAGGAAATCGGCTTCACCAAGGAAATCATCCCGAACTTCTACAGCGTGAAAGAGGCGGTGTTCCCGTTCGCCAAATTCCCT GGCGTTGACCCGATCCTCGGCCCAGAGATGAAGTCCACCGGTGAAGTGATGGGCGTCGGCGATACCTTCGGCGAAGCATTCGCCAAGGCGCAGATGGGCG CCAGCGAAGTGCTGCCGACCGGCGGTACCGCGTTCATCAGCGTGCGCGATGATGACAAGCCGCTGGTTGCAGGCGTGGCCCGTGATCTGATCAACTTGGG CTTCGAAGTGGTCGCCACTGCCGGCACTGCCAAGCTGATCGAAGCGGCAGGCCTGAAAGTGCGCCGCGTGAACAAGGTGACCGAGGGGCGTCCGCACGTG GTCGACATGATCAAGAATGACGAAGTCACGCTGATCATCAACACCACCGAAGGTCGTCAGTCGATCGCCGATTCGTACTCCATTCGTCGCAACGCCCTGC AGCACAAGATCTACTGCACCACTACCATCGCTGCGGGCGAAGCGATCTGCGAAGCGCTGAAGTTCGGTCCGGAAAAAACCGTGCGCCGCTTGCAGGATCT ACACGCAGGATTGAAGGCATGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GCATAACCAAGTACCCAATGACTGTTCAGGGCGCCAAAGCCCTGGAAGAAGAACATGCTCACCTGACCAAGGTCGTTCGTCCGAAGCTCAGCCAGGACAT CGGTACGGCCCGCGAGTTGGGTGACTTGAAGGAAAACGCTGAATACCATGCCGCTCGCGAACAGCAGGGCATGGTCGAGGCGCGGATTCGTGATATCGAA GGCCGGATCCAGAATCAGGTCATCATCGATGTCACGACCATTCCGCATACCGGCAAAGTGATTTTCGGTACCACCGTCGAAATCGCCAACGTCGAGACTG ATGAAAGCGTCACTTACCACATCGTGGGTGAGGATGAGGCTGACTTCAAACTCGGCAAGATTTCCGTCGGTTCGCCGCTGGCCCGCGCCTTGATTGGCAA GGAAGAGGGCGATGTAGTTGCCGTCAAAACGCCAGGCGGCGTGATCGAGTACGAGATTGTCGAAGTTCGTCACATCTGAAAGAAGGCGCCCGCTGCATGC
Amino Acid Sequence
>carbamoyl phosphate synthase large subunit
MPKRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPDMADATYIEPIKWQTVAKIIEKERPDAVLPTMGGQTALNCAL DLEREGVLEKFGVEMIGANADTIDKAEDRSRFDKAMKSIGLACPRSGIAHSMEEANAVLETLGFPCIIRPSFTMGGTGGGIAYNREEFEEICARGLDLSP TKELLIDESLIGWKEYEMEVVRDKKDNCIIVCSIENFDPMGVHTGDSITVAPAQTLTDKEYQILRNASLAVLREIGVETGGSNVQFGICPNTGRMVVIEM NPRVSRSSALASKATGFPIAKVAAKLAVGYTLDELSNDITGGKTPASFEPSIDYVVTKLPRFAFEKFAKADARLTTQMKSVGEVMAIGRTFQESLQKALR GLEVGVCGLDEKLDLSNPESMSVLKRELTVPGAERIWYVADAFRAGLSVEDIFGMNMIDPWFLVQIEDLIKDEEKVKTLGLSSIDRDLMFKLKRKGFSDQ RLAKLLGVTEKNLRTHRQKLEVFPVYKRVDTCAAEFATDTAYLYSTYEEECEAAPSGRDKIMILGGGPNRIGQGIEFDYCCVHAALALREDGYETIMVNC NPETVSTDYDTSDRLYFEPVTLEDVLEICRVEKPKGVIVQYGGQTPLKLARALEAAGVPIIGTSPDAIDRAEDRERFQQMVERLNLRQPPNATVRSEDEA VRAAAKIGYPLVVRPSYVLGGRAMEIVYKEDELKRYLRDAVQVSNDSPVLLDHFLNCAIEMDVDAVCDGKDVVIGAIMQHIEQAGVHSGDSACSLPPYSL PAHIQDEMREQVKKMALELGVVGLMNVQLALQGEDIYVIEVNPRASRTVPFVSKCIGVSLAMIAARVMAGKTLKEIGFTKEIIPNFYSVKEAVFPFAKFP GVDPILGPEMKSTGEVMGVGDTFGEAFAKAQMGASEVLPTGGTAFISVRDDDKPLVAGVARDLINLGFEVVATAGTAKLIEAAGLKVRRVNKVTEGRPHV VDMIKNDEVTLIINTTEGRQSIADSYSIRRNALQHKIYCTTTIAAGEAICEALKFGPEKTVRRLQDLHAGLKA
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site