Pseudomonas fluorescens MEP34, RU10_RS11140
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas fluorescens strain MEP34 contig_14, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
ACCGGTGACAGCCATAAGTGCGCGTCCAGCGAGCCGGGGCGATGGTCGTGGTCATGCTCATTGGCCTCTTCGGCGTGGGAATGGTTGTCTGCGCCGAAAT GGCGCAATTTCAGCCCCGGCAGATCCTGCACCGCGACACTCGGCAGGCTGCGACCGCTGAGCACCCGCGGCAGGAAGCCTTCCATGTCCGGGCCGATCCA GTAAAGCAGATCGACCGACTGCACCTTCCGTACGTCGGAGGGGCGCAGGGCGTAATTGTGCGGCGAGGCACCCGGTGGCAACAGCACCTCGGGAATCGCC ACGCCTTCCTGCACGGCAGCGGCAATCAACTGCAACGGTTTGATGCTGGTGAGCACTTTGACCTCGGCGTGAGCCGTACCGGTCAGCAGAAAAACGGCAA CAAAGGCCACAAAAACAGAAAAAAGTCGGGACACGATGACCACTCAAGGAAGCGAGAACGGGTAACATAATAACGTCTCCAGCAAATCTCGTCGCCGCTC
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| DNA Sequence for Gene |
>RU10_RS11140
ATGCCTATTACACCGATTGCCAGCCGTCCCCACGACCACTCCCATTGCGTGCACAGCGCTTTGTCCGAGGCCGATACCTTGTGCGCGCAAAAAGGTTTGC GTCTGACCGCTCTGCGCCGGCGCGTGCTGGAATTGGTCTGGCAGAGCCACAAGCCACTGGGTGCCTACGACATCCTCGCCGTGCTCAGCGAGCAGGACGG CCGCCGGGCCGCGCCGCCGACCGTGTACCGCGCACTGGATTTTCTCCTGGAAAACGGCCTGGTTCATCGCATCTCGTCGCTCAACGCCTTCGTCGGCTGC GTGCATCCCGAGCATGCGCATCAGGGTCAGTTCCTGATCTGCCGCGACTGTCACGCCGCTATCGAACTTGAGCAAAAAGTGATCAGCGACGCAATTATCA GCAGCGCCAAAGACGTCGGCTTCATCGTCGAAGCGCAGACGGTCGAAGTGGTCGGCCTGTGCGCCGGTTGCCAGGGGGCCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TGAGCAATGCGCTGATCCGTCTGGAGCAGGTCGCCGTCACATTTGCCGGACAGACTGTGCTGGACAACATCGAGCTGAGCGTGGAGCCGGGGCAGATCGT CACCCTGATCGGTCCCAACGGTGCCGGCAAGACCACGCTGGTGCGCGCCGTGCTCGGGCTGTTGAAGCCGAACAGCGGCAGCGTCTGGCGCAAGCCGAAA CTGCGCGTTGGCTACATGCCGCAGAAGCTGCACGTCGATCCGACGCTGCCGCTGTCAGTCCTGCGGTTTCTGCGCCTGGTACCCGGTGTGGATCGCCCGC GTGCCCTGGCGGCATTGAAGGAAGTCGGCGCCGAACACGTGATCGACAGTCCAGTGCAGAGTGTTTCCGGCGGCGAAATGCAGCGCGTGCTGCTGGCTCG GGCCCTGCTGCGTGAGCCTGAGCTGTTGGTGCTCGACGAACCGGTGCAGGGCGTCGACGTGGCCGGGCAGGCCGAGCTGTACAGCCTGATCACCCGTCTG
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| Amino Acid Sequence |
>Fur family transcriptional regulator
MPITPIASRPHDHSHCVHSALSEADTLCAQKGLRLTALRRRVLELVWQSHKPLGAYDILAVLSEQDGRRAAPPTVYRALDFLLENGLVHRISSLNAFVGC VHPEHAHQGQFLICRDCHAAIELEQKVISDAIISSAKDVGFIVEAQTVEVVGLCAGCQGA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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