Pseudomonas fluorescens MEP34, RU10_RS10940

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas fluorescens strain MEP34 contig_14, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
ACCGCCCAACCGTAATCGGCCGGATAGATATCGCTGGTCAGGCGTTCTTCATAACCGTGCAACTGATCCGGCCCACAGAAGTGCATCTTCCCCGACAACG CGGTGCGGTAGCCGAGACGGCGCAGGTAGTGCGCGTAAGTCGGGATATCGGCAGGGAAATCAGCAGCGTTGTCGTAGGCGCCGATCTTGCTCGGCAACTG ACCACTGACCAGGGTGAAACGCGACGGCGCGCACAGCGGGCTGTTGCAATAGGCAGCGTCAAAGACCACGCCTTGGGCGGCGAGGCGGGACAGATTCGGC AGTTTGATCGGCGACGGGCCGTAGAACGGCAACATTGGCGCGGCCATTTGATCGGCCATGATGAAAAGAATGTTCTTGCGCTTCATGTGATCGCGGCATT CCATGTTGAATATTTATGCGAGAGTGCTGCGATCGAGCATGGAGTCCATGCCTGTTCCGGTAAAGCCCGCGCCGGACAATGACTAGGATAAGCACAGCTT
DNA Sequence for Gene
>RU10_RS10940
ATGTATGACGCCCTTGGCGACCTCTCTCTCGATCTGCTGCGCGCCTTTGAGGCGGCGGCACGTCATCGCAGCTTTACCGCCGCTGCGGTAGAGCTCGGTA CCACGCAACCGGCGATCAGCCAGCAGATAAAGCGCCTGGAAGAACAGCTCGGCACGCGTCTGTTCGACCGGATTTATCGGGGCATCGAATTGACAGAAGT CGGCGCCCTGCTCTTCGATCAAGTTGCCCTCGGTTTGCAGAATATCGACGCAGGCTTGAGCGCAATCAGCGCCCAGCAGCAACATGAAGTGCTTCAGGTA GCCACGGATTTCGCTTTCGCCGCCTATTGGTTGATGCCGCGCCTGCACCGCTTCCACGAGGCCAATCCGCACATTGATGTCAGTCTGGTCACCAGCGAGC GCAACCACAATATGCTGCGCACCGATATCGACGTGGCGATCCTGTTTGGCGACGGTCGCTTCAAGCAGGGCGAGAGCCATTGGCTGTTCAGCGAGGAAGT GTTCCCGGTGTGCAGTCCGCTATTGCTCAGGGGCCGCTCACTGCCGCTGCCCGCGCAGGCTTTGCTGGAATTTCCACTGCTGCATTTGCGCGGCGAAAAC AGCAGCAACTGGTTTGACTGGAGCGGGCTGTTCCGTCAACTGGGCCTGACCACGCCGCCGGCGCCGGGGCAGTTGCGCTTCGACAATTACACGTTGTTGA TCCAAGCGGCGATCGGCGGGCAAGGCGTGGCGATCGGCTGGCGTCACCTTGTGGATAACTTGCTGGTGCAGGGGCTGCTGTGCCGGCCGCTGGCGCAAAC CACGTTGTCGCGGCTGGGGTATTACGTGGTGTTGCCGCAACGCAAGCGCCGCGGTGCGTTGATTCAACTGTTCGTTGACTGGTTGATGGCCGAGCAGGCC AGCAGTGCGGAATCTCTCAACGGTCTGACTCTGCCTTCAATTGCGGTGTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
AGCGAAAAGATCGCAGCCTTCGGCAGCTCCTACAAATGGAATGCGATCTCATGTAGGAGCTGCCGCAGGCTGCGATCTTTTACGAATCAGAAGCCGCCAC AAAATTCACATGCTCACCGATATGCAGATTCAACCGCAGCTCATCGGCAATCCCCACCGCCACACGGTTCAAGCGTTCCAGCGGTTCGGCCAGACCCGGT TCGAGATTGCCGCCAACCTGACTGAAGTGCTCGATGGTCAACCCGGCAACGCCATGCGGCGCGTTGACCAAGGTCCAGCGCAGTGAGCTGCTTTGCACCG CTTCGAGGATTTCTTCGGCGGCGTGCCGTTGCAGGCGATCATCACTGTCAGGCTCGTCGAGCACGCCAAAGTTGCCCACCAGGAACAAGCGCGGCACGCT GGCCAGTTGCAAACCTTCGACCAGTGCGTCGACTGCCAGCACCTGCTCGACCGGCCCCAGTGTCACCGAGCGCTCGACATGGTCGCTGCTGAACGGCAGC
Amino Acid Sequence
>LysR family transcriptional regulator
MYDALGDLSLDLLRAFEAAARHRSFTAAAVELGTTQPAISQQIKRLEEQLGTRLFDRIYRGIELTEVGALLFDQVALGLQNIDAGLSAISAQQQHEVLQV ATDFAFAAYWLMPRLHRFHEANPHIDVSLVTSERNHNMLRTDIDVAILFGDGRFKQGESHWLFSEEVFPVCSPLLLRGRSLPLPAQALLEFPLLHLRGEN SSNWFDWSGLFRQLGLTTPPAPGQLRFDNYTLLIQAAIGGQGVAIGWRHLVDNLLVQGLLCRPLAQTTLSRLGYYVVLPQRKRRGALIQLFVDWLMAEQA SSAESLNGLTLPSIAV
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site