Pseudomonas fluorescens MEP34, RU10_RS10010

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas fluorescens strain MEP34 contig_12, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
TGATCCGCATCACCCGCATGCGCGCATAACCTGCCTATTACAAGGAGTCCTACATGACCAAAACCGTCATCACCAGCGACAAGGCCCCGGCCGCCATCGG TACTTACTCCCAGGCGATCAAGGCAGGCAATACCGTTTACATGTCGGGCCAGATCCCCCTTGACCCGAAAACCATGGAACTGGTCGAAGGCTTCGAAGCC CAGACCGTCCAGGTCTTCGAGAACCTCAAGGCCGTAGCCGAAGCCGCCGGCGGTTCGTTCAAGGACATCGTCAAACTGAACATTTTCCTCACCGACCTGA GCCACTTCGCCAAGGTCAACGAGATCATGGGCAAGTACTTCGACCAGCCCTACCCTGCCCGCGCCGCCATCGGCGTGGCCGCCCTGCCGAAGGGTGCGCA GGTTGAAATGGATGCCATTCTGGTCATCGAGTGATGCGCACGGCGCGGCCTTCAACGCCGCGCCGACTGCCGCAAGAAAAGGTTTTGAAAGGATTCCACC
DNA Sequence for Gene
>RU10_RS10010
ATGCGCAAAGCGCTAGCTCTCTCGCTGCTCGCCCTGTTCCTCGGCGGCTGCGCCAGCGACCCTGCCGACCGCGACATCAGCGGCACCTGGATCAACCAGG TGGCGATCGATGCCGCCGCCAAGGGCGGCCCTCTGCGCGAAGCGCTGCAGGCCTACGGCCCGAATCTGGAATGGGACGTCAACACCAAGGCCGGTCAGGC TCGCTACACCAACGGTTTTGAGAATGTCGAAGGACGGTTGCTGGGCCAAGAGTCCGGCGCCTGGAAAGTCGACTTCTATGGCAGCTCCGCCAGCGAACTG AAACGCGACGGCGGACGCCTGCAGCAAGCCGCCAGCGACAACGAACCCGAACAACTCTTCGATCGCGCACAGATCCCGGTGCCCGAAGGCGCCCCAATCG GTGCGAGCTTCGAACGCGCGCTGTACTCGGCGTACCTGGGCGGCAACTGGACCATCACCAGCGGCCAAGGTGAAGGCGGCACCGTGCAGTTCCAGGCTGA CGGTCAGGTGACCGGCCTTCCGGGCGTTGACCGTTATGCCTTGTGCCTGGCCGGCGATTGCGCATCGATGAGCAATGGCAACGACAGCATGTGGCTGCAA CTCAATGGCCAGGGCAACAACTGGATCTTTGTGCGCAAGGGCAAGGAACTGGAGATTCTGCAGGCAGTGAATGCTGCGCTGGCGGATGAGCAACCGCAGT TTGCCGCGGGCGAGCGCAAGTGGTTGCTGGAGAAGCAGTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CCCGCTTCTGAATTCACATAGAACCCATGTAGGAGTGAGCCTGCTCGCGATAGCGGTATGTCAGACACATTGATGTCGACTGACACAACGCTATCGCGAG CAGGCTCACTCCTACAGTTGTTTTGTGGAGGCAGAAAGTCAGCACTTACCTTCAAGGATCGCTGCATAGCCTTCACGGTAACTCGGATACTTCGGCACCC AGCCCAACGCTTTCGCCCGCGCATTACTGCAACGCTTGCTGCCGGTGCGGCGCACGCTGGCGTCTTCCGCCCATTCAGTTACACCCAGATATTCGCGCAA CCAGCCCACCACCTCCGCCAATGGCGCTGGCGCGTCATCCACACCGATATAGAGCTCGTCCAGCTTCACGCCCTCGCGGTCTTTCTCCAGCAGAAACGCC AGCAAGCCGGCGGCATCATCGGCATGAATCCGATTGCCATACAGCGGCGGCTCGACCGCCACGCGATAACCACGACGCACTTGAGTCAGCAGCCATTCGC
Amino Acid Sequence
>lipoprotein
MRKALALSLLALFLGGCASDPADRDISGTWINQVAIDAAAKGGPLREALQAYGPNLEWDVNTKAGQARYTNGFENVEGRLLGQESGAWKVDFYGSSASEL KRDGGRLQQAASDNEPEQLFDRAQIPVPEGAPIGASFERALYSAYLGGNWTITSGQGEGGTVQFQADGQVTGLPGVDRYALCLAGDCASMSNGNDSMWLQ LNGQGNNWIFVRKGKELEILQAVNAALADEQPQFAAGERKWLLEKQ
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site