Pseudomonas fluorescens MEP34, RU10_RS09665

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas fluorescens strain MEP34 contig_12, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
TGACCGTCAACCTTCACAGTAATCTGGCCTTGAAGTGCCTTCTTGCTGCCTTTGAAAAATTCCAGCGAATATTTTTTAGCTTGTGAACCGCTCATTTAAA TCTCCTTATCGACACATTGGTCAAAATTCATATTTACTGAAAAACTCGCAACATCCACTAAACAATTAGCGACATCCACTGGCAAACTAGACCCGACTTA TGTAGCTGTCAAAAAAAATACCTATAAATAAAAATATTCGACAAACGGTTAACAATTCGCCAAAAACCTGTGATTTCTGACAGTAGACCAAGCGCAGCTT AATATTTAGAATTGTCATGGGCCATGTCCTGATCTGATTACTCAACGGCTTAGAGGCAACTTTAAAAACATAACTTGCAACTTGCAAATCTCTCGTCAGA GATTGGAAGTTTAACTTCCAATATAATCTCGACATTACAAATTATCTTGAGCGGCACATAAATTGCTGGTGTATCCCCATCCATGATCGGGGAACTTCTT
DNA Sequence for Gene
>RU10_RS09665
ATGCTCCACTCCCACCTCACCACCCTCAACGCGGTCTCGCTGATCCTCAACACCTTCAAGGCCGAAGGCCTGTCGAGCGAGGCGTTGCTGGCTGGCAGCG GCATCGTTGCGGCGGATCTGCAGCGGGCCGACACGCGCATCACCACCCATCAGGAGATGCAGGTCTGCACCAACGCGGTCGCGCTCAAGCGTGACATCGG CCTCGAACTGGGCCGGCGCATGCACGTCTCCTGTTACGGCATGCTCGGTTACGCCCTGCTGACCTGTGCCACCTTCGGTGACGCTTTGCGCCTGGCGATC CGTTATCCGGCGCTGTTGGGAACGCTGTTTGAACTGAGCCTGGAAGACGATGGCGAGCAGGTATGGTTCGTCGCCGCCGACTATCGCGAGAGTCCGGCCA TGGCGGTGTTCAACGCCGAATTTTGTCTGGTGTCGCTGAAAGTCATCTGCGACGACTTGCTCGGCCATGCGCTGCCGCTGCGCGCTACGCGTTTCGAGCA CGCCGCGCCCGATTACCGCGACAGTTATGCTGAACCTTTCAACTCGCCGCTGCAGTTCTCGGCCAAGGACAACGCCTTCGCCTTCGACCGCCACTGGCTG GATCAGCCGTTGCCGCTGGCCGACGCTATTACCCATCAGGCCATGGCCGAACGTTGCCGCAAGCAGAATCTGGAGTTCACCGGACGTCAGGCCTGGCTGG GGCGGATTCGTCAGCTGCTCAGCGCGCAATTGAATGGCGCGCCGGGACTCGAAGGGCTCGCGCAGCAGATGAAGTGTTCACCGCGCACCCTGCGCCGACA TCTGAAAGACATGGGCAGCAGCTATCAGGAACTGCTCGATGAATTGCGTTTCGAGCGGGCCAAACAGATGTTGTGTGAGGATCAGTTGCCGATCTATCGG ATCGCCGAGACGCTGGGCTTCAGTGAGACCGCCAGTTTCCGCCATGCCTTTGTGCGCTGGAGCGGCGTGGCGCCGAGTCAGTTCCGGCCGCATTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TCTTCCCTGTAGGAGTGAGCCTGCTCGCGATGGCTATTTATCATCCAACACATTCTTTGCCTGACGGACCGCTATCGCGAGCAGGCTCACTCCTACAAGG GTTCGTAATTCACCCTTGAGCCAGCGTTATCAAGGGGCGAATTGCGGTCAGAGGTTTTGGCCATTTCGATCCCCTTTTGGCCGCTCCCGACGTTCCCCGA TTCACCTCGCCCCGCAACACTGAAGACCACCGAATCAGCCCTGCGGAGAACAACAAATGCTGACGATCTACTCAGACGATCACCACTTGCACCATGGCCG CTGTGAGCTCATCGATGGCCAGCTCAAGCCATGCTTCGAGATGCCCTCTCGTGCCGACCACGTACTGCAACGGGTGCAGAAGCAGAATCTCGGTGCCGTC GAAGCGCCGAAGGATTTCGGTCTGGAGCCGATCGCGCGCATTCACAGCCGTGACTATCTGGAATTTTTCAAAGGTGCGTGGGATCGCTGGACCGCGTTCA
Amino Acid Sequence
>AraC family transcriptional regulator
MLHSHLTTLNAVSLILNTFKAEGLSSEALLAGSGIVAADLQRADTRITTHQEMQVCTNAVALKRDIGLELGRRMHVSCYGMLGYALLTCATFGDALRLAI RYPALLGTLFELSLEDDGEQVWFVAADYRESPAMAVFNAEFCLVSLKVICDDLLGHALPLRATRFEHAAPDYRDSYAEPFNSPLQFSAKDNAFAFDRHWL DQPLPLADAITHQAMAERCRKQNLEFTGRQAWLGRIRQLLSAQLNGAPGLEGLAQQMKCSPRTLRRHLKDMGSSYQELLDELRFERAKQMLCEDQLPIYR IAETLGFSETASFRHAFVRWSGVAPSQFRPH
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site