Pseudomonas fluorescens MEP34, RU10_RS09155
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas fluorescens strain MEP34 contig_12, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
TCGAGTTGCCCCATGACGCTGCGTTCTTCATTGCCCAGCGCATCCGTTCCAACGTCCGCGAACTGGAAGGCGCGCTGAAACGCGTGATCGCCCACTCGCA CTTCATGGGCCGCGACATCACCATCGAGCTGATTCGCGAATCCCTGAAAGACCTGTTGGCATTGCAGGACAAACTGGTCTCTGTGGATAACATTCAGCGC ACCGTCGCCGAGTATTACAAGATCAAGATTTCCGACTTGCTGTCCAAGCGGCGTTCGCGCTCGGTGGCACGTCCGCGTCAGGTGGCCATGGCGTTGTCCA AGGAACTGACCAATCACAGCCTGCCGGAAATCGGCGATGTGTTTGGCGGCCGCGACCACACCACCGTGCTGCACGCCTGCCGCAAGATCAACGAACTTAA GGAATCCGACGCGGACATCCGCGAGGACTACAAGAACCTGCTGCGTACACTGACCACTTGATGAACACCAGCGCAGCTTATTAAGGCAAGGGACGAGACC
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| DNA Sequence for Gene |
>RU10_RS09155
ATGCATTTCACCATTCAACGCGAAGCCCTGTTGAAACCCCTGCAACTGGTCGCAGGCGTCGTCGAGCGTCGACAGACCTTGCCGGTACTGTCCAACGTGC TGTTGGTCGTCGAAGGCCAGCAATTGTCGCTGACCGGTACCGACCTTGAGGTCGAACTGGTCGGTCGTGTGCAACTTGAAGAGCCGGCCGAAACTGGTTC CATTACCGTGCCTGCGCGCAAGTTGATGGATATCTGCAAAAGCCTGCCCAACGATGCGCTGATCGACATCAAGGTCGACGAGCAGAAGCTGGTGGTGAAG GCCGGCCGTAGCCGTTTCACCCTGTCGACCCTGCCGGCCAACGATTTCCCGACCGTCGAAGAAGGCCCGGGCTCGCTGACCTGCAGCCTGGAGCAGAGCA AACTGCGTCGACTGATCGAACGCACCAGCTTCGCCATGGCCCAGCAGGACGTGCGTTATTACCTCAACGGCATGCTGCTGGAGGTTTCCGCGGGCGTAAT CCGCGCCGTGGCCACCGATGGTCACCGTCTGGCGATGTGCTCGATGCAGGCCGATATCGGTCAGCCGGATCGCCATCAGGTGATCGTGCCGCGCAAAGGT ATCCTCGAACTGGCGCGTCTGCTCACCGAGCCCGATGGCAACGTCAGCATCGTCCTCGGTCAGCACCATATCCGCGCTACCACCGGCGAGTTCACCTTCA CCTCGAAACTGGTCGACGGTAAATTCCCGGATTACGAGCGCGTACTGCCGAAAGGTGGCGACAAGCTGGTACTCGGCGATCGTCAGGCATTGCGTGAAGC GTTCAGCCGTACCGCGATTCTGTCCAACGAGAAGTACCGCGGTATCCGTCTGCAACTGGCCAGCGGCCAGTTGAAAATCCAGGCCAACAACCCGGAGCAG GAAGAAGCGGAAGAAGAAGTGGGTGTTGAATACAACGGCGGCTCCCTGGAAATCGGCTTTAACGTCAGCTACCTGCTCGACGTGCTGGGCGTGATGACCA CCGAGCAGGTACGCCTGATCCTGTCCGACTCCAACAGCAGTGCGCTGGTGCAAGAGTCCGACAATGACGACTCGGCTTACGTTGTCATGCCGATGCGTCT GTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TCAGCTGATCCTGAATGTCGTTAAGTCGTGTTTCGGTCACCGCGGTGCGCAATCTGCACCCGGTGACCTTCTCCCCCTCCCCCCGCATCAACATCCTTTA CGGCGCCAACGGCAGCGGCAAAACCAGTGTTCTGGAAGCCATTCACCTGCTGGGGCTTGCCCGTTCGTTTCGTAGCACGCGGCTGTTGCCTGTCATTCAG TACGAACAACTCGCCTGTACCGTATTCGGTCAGGTTGAACTGGCGGAAGGTGGTCAGAGTGCCTTGGGGATTTCTCGAGACCGTCAGGGCGAGTTCCAGA TTCGCATCGATGGCCAGAACGCCCGCAGCGCTGCACAACTGGCCGAGATCCTGCCACTACAGTTGATCAACCCGGACAGTTTCCGTCTGCTGGAAGGTGC GCCGAAGATTCGCCGGCAGTTTCTCGATTGGGGCGTGTTCCACGTCGAACCGCGTTTCATGGCCACATGGCAGCGGCTTCAGAAGGCCTTGCGCCAGAGA
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| Amino Acid Sequence |
>DNA polymerase III subunit beta
MHFTIQREALLKPLQLVAGVVERRQTLPVLSNVLLVVEGQQLSLTGTDLEVELVGRVQLEEPAETGSITVPARKLMDICKSLPNDALIDIKVDEQKLVVK AGRSRFTLSTLPANDFPTVEEGPGSLTCSLEQSKLRRLIERTSFAMAQQDVRYYLNGMLLEVSAGVIRAVATDGHRLAMCSMQADIGQPDRHQVIVPRKG ILELARLLTEPDGNVSIVLGQHHIRATTGEFTFTSKLVDGKFPDYERVLPKGGDKLVLGDRQALREAFSRTAILSNEKYRGIRLQLASGQLKIQANNPEQ EEAEEEVGVEYNGGSLEIGFNVSYLLDVLGVMTTEQVRLILSDSNSSALVQESDNDDSAYVVMPMRL
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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