Pseudomonas fluorescens MEP34, RU10_RS09115

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas fluorescens strain MEP34 contig_12, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CAGCAAGCGGGCGGCATCGAGTGCTACCCGGTGACCGGCGAGATCACCTACGGTCTCGAGCGCCTGGCCATGTACCTGCAAGGCGTCGATTCGGTCTACG ACCTGGTCTGGGCTGACGGCCCGTTCGGCAAAGTCACCTACGGCGACGTGTTCCACCAGAACGAAGTGGAGCAGTCCACCTACAACTTCGAACACGCCAA CGTCGACAAATTGTTCGAACTGTTCGACTTCTATGAAAGCGAAGCCAAGCGCCTGATCGAACTCGACCAGCCGCTGCCGTTGCCAAGCTACGAAATGGTG CTGAAGGCTTCGCATACCTTCAACCTGCTGGATGCGCGCCGGGCGATCTCGGTGACTGCGCGTCAGCAATACATTCTGCGCGTGCGCACCCTGGCGCGTT CCGTTGCGCAAGCCTACCTGCTGGCACGCGCCAAGCTGGGCTTCCCGATGGCGACCCCGGACCTGCGTGACGAAGTACTGGCCAAGCTGGAGGCTGCACA
DNA Sequence for Gene
>RU10_RS09115
ATGAGTGCGCAAGATTTTCTGGTTGAACTGGGCACCGAAGAACTGCCACCCAAAGCCCTCAACACGTTGGCTGAAGCGTTCCTCGCCGGTATCGACAAGG GCCTGCAAGCCGCCGGCCTGAGCTACGAAAGCAAAACCGTTTATGCCGCGCCGCGTCGCCTGGCCGTGCTGATCACTGCGCTGGCCACTCAGCAGCCGGA TCGCAGCATCAACCTCGACGGCCCGCCACGTCAGGCCGCGTTCGACGCTGACGGCAATCCGACTCAGGCCGCCCTCGGCTTCGCCAAAAAGTGCGGCGTC GACTTGAGCGAGATCGATCAAAGCGGTCCGAAACTGCGCTACAGCCAGAACATCGCCGGCAAGCCGACCGCGAGCCTGCTGCCGACCATCGTCGAAGATT CGTTGAACGACCTGCCAATCCCGAAACGCATGCGTTGGGGTGCGCGCAAGGAAGAGTTCGTGCGTCCGACCCAGTGGCTGGTGATGTTGCTCGGTGATCA GGTCATCGACTGCACCATCCTCGCGCAGAAGGCTGGCCGCGATTCCCGTGGTCACCGTTTCCACCATCCGGAAGCCGTGCGCATCGGTTCGCCGTCGAGC TACCTCGCCGACCTGCGTGCCGCGTATGTGTTGGCCGACGCCAACGAGCGTCGCGAAATCATCAGCAAGCGTACCGAAGAACTGGCCACGCGCCAGGAAG GCACGGCAATCGTGCCGCCGACGCTGCTCGACGAAGTGACCGCACTGGTCGAATGGCCGGTGCCGCTGGTGTGCTCGTTCGAAGAACGTTTCCTCGACGT GCCGCAGGAAGCGCTGATCACCACCATGCAGGACAACCAGAAGTACTTCTGCCTGCTGGATGCCGACGGCAAGTTGCTGCCACGTTTCATCACTGTGGCC AACATCGAAAGCAAAGATCCGCAGCAGATCATCGCCGGTAACGAGAAAGTCGTGCGCCCACGTCTGACCGACGCCGAATTCTTCTTCAAGCAGGACAAGA AGCAGAAGCTCGAAGCGTTCAACCTGCGCCTGCAGAACGTGGTGTTCCAGGAAAAACTCGGCAGCGTCTACGACAAGGCCGAGCGCGTATCGAAACTGGC CGCGTACATCGCCGCACGCATTGGCGGCAACGCTTCGTGGGCTGCCCGCGCAGGCCTGCTGTCGAAGTGCGACCTGGCCACCGAAATGGTCGGCGAGTTC CCGGAGATGCAAGGTGTCGCCGGTTACTACTACGCCCTCAATGACGGCGAGCCGCAGGACGTCGCGCTGGCATTGAACGAGCAGTACATGCCACGCGGTG CCGGCGCGGAATTGCCGGCGACCCTGACCGGTGCGGCCGTCGCCATCGCCGACAAGCTCGACACCCTGGTCGGTATCTTCGGTATCGGCATGCTGCCAAC CGGCAGCAAAGACCCGTATGCCCTGCGCCGCGCGGCACTGGGTGTGCTGCGTATCCTGATCGAAAAGAAACTCGATCTCGACCTGAACGACGCCGTGGCC TTCGCCGTGACTGCGTTCGGCGGCAAGGTCAAGGCTGCCGGCCTCAACGAGGCGGTGCTGGAGTTCATCTTCGACCGTCTGCGGGCGCGCTATGAAGACG AAGGCGTCGATGTCGCCACCTACCTGTCGGTACGTGCGCTCAAGCCGGGTTCGGCGCTGGACTTCGACCAGCGTGTACAAGCGGTGCAGGCCTTCCGCAA ACTGCCGGAAGCGGCAGCGCTGGCAGCGGTGAACAAGCGTGTGTCGAACCTGTTGAGCAAAGTCGAAGGCTCGGTACCGACCGTGGTCGAAGCCAAGTAC TTCGACAATGCCAACGAGTTCTCGCTGTACTCGGCGATCCAGCAAGCGGATCAGGCGGTGCAGCCGATGGCCGCGGCGCGTCAGTACAACGAATCGCTGG CGCGCCTGGCGGCACTGCGCGAGCCGGTCGACGCGTTCTTCGACGCGGTGATGGTCAATGCCGACGATGCCAATGTGCGGGCCAACCGTTACGCGCTGCT GGCGCGCCTGCGTGGCCTGTTCCTCGGCGTTGCCGACATTTCGCTGCTGGGTTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GGGACTGCTGTTGAAACTGCTGATTCTCGATCGTGACGGCGTGATCAATTACGACTCCGATGCCTACATCAAGTCGGTGGAGGAGTGGATTCCGCTGCCC GGCTCGATCGCAGCGATCGCGCAGTTGAGCAAGGCCGGCTGGACGGTGGCGGTGGCCACCAACCAGTCGGGCATTGCTCGCGGCTATTACGACCTCGCCA CCCTCGACGCCATGCACGCGCGCCTGCGCGAGCTGGTGGCGGAGCAGGGCGGTGAAGTCGGCTTGATCGTTTACTGCCCGCATGGCCCGGATGAAGGTTG CGATTGCCGCAAGCCGAAACCGGGGATGCTGAAAACCATCGCCGCGCATTACAACGTCGAGCTGACCAATGTCTGGTTCGTCGGCGACAGCCTTGGTGAC CTGGAGGCCGCCAAAGCCGTCGATTCACAGCCAGTTTTGGTGAAGACCGGAAAAGGCGAGAAGACTCAGGGCAAGACCCTGCCGGTTGGCACTCTGATTT
Amino Acid Sequence
>glycine-tRNA synthetase subunit beta
MSAQDFLVELGTEELPPKALNTLAEAFLAGIDKGLQAAGLSYESKTVYAAPRRLAVLITALATQQPDRSINLDGPPRQAAFDADGNPTQAALGFAKKCGV DLSEIDQSGPKLRYSQNIAGKPTASLLPTIVEDSLNDLPIPKRMRWGARKEEFVRPTQWLVMLLGDQVIDCTILAQKAGRDSRGHRFHHPEAVRIGSPSS YLADLRAAYVLADANERREIISKRTEELATRQEGTAIVPPTLLDEVTALVEWPVPLVCSFEERFLDVPQEALITTMQDNQKYFCLLDADGKLLPRFITVA NIESKDPQQIIAGNEKVVRPRLTDAEFFFKQDKKQKLEAFNLRLQNVVFQEKLGSVYDKAERVSKLAAYIAARIGGNASWAARAGLLSKCDLATEMVGEF PEMQGVAGYYYALNDGEPQDVALALNEQYMPRGAGAELPATLTGAAVAIADKLDTLVGIFGIGMLPTGSKDPYALRRAALGVLRILIEKKLDLDLNDAVA FAVTAFGGKVKAAGLNEAVLEFIFDRLRARYEDEGVDVATYLSVRALKPGSALDFDQRVQAVQAFRKLPEAAALAAVNKRVSNLLSKVEGSVPTVVEAKY FDNANEFSLYSAIQQADQAVQPMAAARQYNESLARLAALREPVDAFFDAVMVNADDANVRANRYALLARLRGLFLGVADISLLG
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site