Pseudomonas fluorescens MEP34, RU10_RS08250

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas fluorescens strain MEP34 contig_11, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GTAACTGACCTTGATCTGCCCGCTGGCCGCAGCCGGGATTTTCACTTCCAGGCCTTGGCGATACACCGGCTGCTCGCCGAAGAACTCGTCGCTATGGGAT TCGCCTTCAGGCAACACTGGCTGCTGATCGGCGGCCAGTCCGTCGAACTTCAAGCGTTTCTGATACAGGTAGTAGCCGTCGGTGATCTGCCAGAACAGCT GGGTTTCCCCCGATTCCAGACGCTCGGAGGTGAGTACGAATGCCTCGTCGACGGGTAAAAAGTCCGGCTTGGACTCGAACGGATTGTTTCCGGCCTGGGC CAGACCGGAAATCAGTAAAGCAAACAGAAGAAAAAAATGACGCATGGAGGAGCCTTGTCCCTGTGCAATTGAGGTGCACAATGGGCAGCGGCGATTAACC GATGATTAACCGCGATGCCCTTGTCGCAGTGACGTTCGGCGCCATAATGTCAGCTTAATCGGCCAACCGCCTAATCCGCTTTTTTCCTGTGGGATTCACC
DNA Sequence for Gene
>RU10_RS08250
ATGCACGTACTGGTTTGCGAAGACGATGAGCTGATCGCCAGCGGCATCGTTGCCGGGCTCACGGCTCAGGGCCTGACCGTCGAGCACGTCAACACGGCGT CGAAAGCGCGGGCGATGCTCAAGGTCGCCGAGTTCGACGTGATGGTGCTCGATCTTGGCCTTCCCGACGAAGATGGCCTCAAGTTGCTCCAGCAATTGCG CCAGAGCGGCCTGGAGATTCCGGTGCTGATTCTCACCGCCCGCGATTCTGTGACGGATCGTGTCGACGGTTTGCAGGCCGGCGCCGACGATTACCTGCTC AAGCCTTTCGACCTGCGCGAACTGTTCGCCCGCCTGCAAACCCTGTTGCGCCGAGTGGCCGGGCGCAGCGTCAATCTGATCGAACATGGCGCGCTCACCT ACGACCCGAGCAGCCGGGAAACCCGCCTGGCCGGGCAACCGGTGGACTTGTCGCGCCGCGAGCAATCGCTGTTGCAGGCGTTACTGCACAATCGCGGCCG GGTGCTGTCCACCGAGCAGTTGAAGGACAGCGTCTATGGCTTCAACGATGAGCTGGAAAGCAATGCGCTGAACGTGCATATCCATCATCTGCGCAGCAAG CTTGGCAAAGGCATCGTCGAAACCGTGCGCGGTCTGGGCTATCGCCTCGGGCCTGCCGATGGCGGGGAGCAGGGCAAGTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TGAGTCTGCGCCTGCGCCTGAGCCTGACGCTCGGCGCCGCATTCGCGCTGATCTGGGCGCTGGCTGCGGCGTGGATGCTCAGCGATCTGCGCAATCAGAT GATGTTTTCCCTCGACCAGCGCCTGGTTGCCTCGGCGCGCATGGTCGCCGGTCTGCTCGAGCAATTGCCGACGCTGCCGAGCAAGGGCGAAGGCACTCAC TTCAGCGCTGAACAGCTGAATATTCCCGGGGGGATGGCCTGTCAGGTCAGCTCATTGCGCGGCGAGATTCTAGCCCGCAGCCACAACAATCCCGAACAAG CGCTGGAAGCGGAAAAAATGGGCTTCCACGATCAGATGATCGACGGCGCACCGTGGCGCAGTTTCACCCTGGCCCGCGGCGATGTGCGCATCACTACCGC AGACCGGCAGATCGAGCGTGAAGCGTTGAACATGTCGATCCTGCTCGCCGCTTCGGTACCGGTCGGCGTGGCCTTGCTGGGTTGTCTGTGCTTGCTGTGG
Amino Acid Sequence
>transcriptional regulator
MHVLVCEDDELIASGIVAGLTAQGLTVEHVNTASKARAMLKVAEFDVMVLDLGLPDEDGLKLLQQLRQSGLEIPVLILTARDSVTDRVDGLQAGADDYLL KPFDLRELFARLQTLLRRVAGRSVNLIEHGALTYDPSSRETRLAGQPVDLSRREQSLLQALLHNRGRVLSTEQLKDSVYGFNDELESNALNVHIHHLRSK LGKGIVETVRGLGYRLGPADGGEQGK
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site