Pseudomonas fluorescens SF4c, QS95_RS09100 (fadH)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas fluorescens strain SF4c contig_7, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GCTCCGGCAGGATGACCACGGTTTTTTCATTCAACAGGCCTTGATCCTGCGCCTGCTGCAAATAGGCGGCGAGCTTGCGGTGCAGGCGTTCGGGGCTTTG GTAGTCGGTGGGGAACAGCTCGGGCTGGATGCCCAGCAGGTTGCCGCGATCGGCTGGGGTGCCCTGATCGACCGCGAGTTTGATCCGCAGGTCTGACAGG TAATGACCGGCCGGACGGTCAGCCGCCCACATGGCGTAGAAGGTGAGCGCGGCGATGAGCGCCATGGAAAAAGTCAGGTACAGAAGTTTGCGCATGAAAT CCAACAGCAACCGGGTACAGGGTGTGCGGACAGGGTAGGGCGCCAGCCCCGGCTTGCCAAGGGGCGCTGCGCATTTGGATCAATAACTTGTCAGTTACGG TCATTGAGTGACAGCGATGCGACTCCTAATCTGTCGAGCATGACTGACGGGGGACGCAGAGCTCCCGCATTTTCCGTGATTGCTTGCTGTGGAGTTAACG
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| DNA Sequence for Gene |
>QS95_RS09100
|fadH
ATGACCGCCACTCAATACCCGCACCTGTTGGCCCCGCTGGACCTGGGATTCACCACGTTGCGCAACCGCACCCTGATGGGTTCGATGCACACCGGCCTTG AAGAGAAGCCGGGTGGTTTCGAACGCATGGCGGCGTATTTCGCCGAGCGTGCCCGTGGCGGTGTCGGCCTGATGGTGACCGGCGGTATCGGTCCGAACGA CGAGGGCGGTGTGTATTCCGGCGCGGCCAAGCTGACCACCGAGGAAGAAGCGCTCAAGCACCGCATCGTCACCCGTGCCGTGCATGATGCGGGCGGCAAG ATCTGCATGCAGATCCTCCACGCCGGCCGTTATGCCTACAGCCCGAAACAGGTCGCACCGAGCGCGATCCAGGCGCCGATCAACCCGTTCAAGCCCAAAG AGCTGGACGAGGAAGGCATCGAGAAACAGATCCGCGATTTCGTCACCTGTTCGGTACTGGCCCAGACCGCCGAGTACGATGGCGTGGAAATCATGGGCTC GGAAGGTTATTTCATTAACCAGTTCCTCGCCGCCCACACCAACCACCGCACCGACCGTTGGGGCGGCAGCTACGAAAACCGCATGCGCCTGCCGGTGGAA ATCGTACGCCGCGTACGTGAAGCGGTCGGCCCGAACTTCATCATCATCTTCCGTCTGTCGATGCTCGATCTGGTGGAAGGCGGTAGCACATGGGAAGAAA TCGTCACCCTGGCCAAAGCCATCGAGCAGGCCGGTGCGACCCTCATCAACACCGGCATCGGCTGGCACGAAGCGCGGATCCCGACCATCGCCACCAAAGT GCCGCGTGCGGCGTTCAGCAAGGTCACGGCCAAGCTGCGTGGCTCGGTGAAAATTCCGCTGATCACCACCAACCGCATCAACACCCCGGAAATTGCCGAG CAGATCCTTGCTGAAGGCGATGCCGACATGGTCTCGATGGCGCGGCCGTTCCTCGCCGACCCGGACTTCGTCAACAAGGCCGCCGAAGGCCGCGCCGACG AAATCAACACCTGCATCGGTTGCAACCAGGCCTGCCTCGATCACACCTTCGGCGGCAAGCTCACCAGTTGCCTGGTCAACCCGCGTGCCTGCCACGAGAC CGAACTCAACTACCTGCCGGTCAAGCAGATCAAGAAGATCGCCGTGGTCGGTGCCGGTCCTGCCGGTCTGTCCGCCGCCACCGTGGCCGCCGAGCGCGGG CATCAGGTGACGCTGTTCGATTCGGCCAGCGAAATCGGTGGCCAGTTCAACGTCGCCAAACGTGTGCCGGGCAAGGAAGAGTTTTACGAAACCCTGCGTT ACTTCAAACGTAAACTGCAGACCACCAACGTCGAGGTGTGCCTGAACACCCGCGTCGACGTGGCAAAACTGGTCGAGGGCGGTTACGACGAAGTCATTCT GGCGACCGGCATTGCGCCGCGTCTTCCGGCGATTCCGGGTGTCGACAACGCTAAAGTGCTGAGCTACCTGGATGTGCTGCTCGAGCGCAAACCGGTCGGC AAGCGTGTGGCGGTGATCGGTGCCGGCGGTATCGGTTTCGACATGTCGGAATTCCTCGTCCACGAAGGGGTGGCCACCAGTCAGGATCGCGCCGCGTTCT GGAAAGAGTGGGGCATCGACATGCATCTGGAAGCCCGTGGTGGCGTGGCCGGGATCAAGGCTGCACCGCACGCACCGGCGCGCGACGTGTTCCTGCTGCA ACGCAAGAAATCCAAGGTCGGCGACGGTCTGGGCAAGACCACCGGCTGGATTCACCGCACCGGTCTGAAGAACAAGCAGGTGCAGATGCTCAACAGCGTC GAATACCTGAAAATCGACGACGAAGGCCTGCACATCCGCATCGGCGAAACCGGCGAGCCGCAAGTGCTGCCGGTGGACAACATCGTCATCTGCGCCGGCC AGGATCCGCTGCGCGAGCTGCACGACGGTCTGGTCGAAGCCGGGCAGAACGTGCACCTGATCGGCGGCGCCGATGTGGCGGCCGAGCTGGATGCCAAACG TGCGATCAATCAGGGCTCGCGTCTGGCCGCCGAGCTCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TCCACCCTAGAATGCCGGCTCTTTGCACAGAGCCGGCTTTCATGTTTCTGCCTCCCACCGACTGGCTGCCTCAAGCCCCCCTCGAACCGCTGCATCTGGA CTGGCTCACTGCCGCCGGCATTGAAGTGGCGGTCCTGCGTCTCGATCGGATCGATCCGCTGATCAGCGGCAACAAGTGGTTCAAACTCGTCGAGCATCTC AAAGCCGCCGACCGTGCGGGTGCCGAGGGCATCATCAGCCTGGGCGGTGTGCACTCCAATCATCTGCATGCGCTGGCCGCTGCCGGCAAACGCCTGGGAT TCGCAACGGTCGGGCTGTTGCGCGGGCATCCGCAGGACACGCCGACGGTCAGGGACCTGCAGGATTTCGGCATGCTGCTGCACTGGCTCGGTTACGGCGG CTATCGGGCGCGGCACGAGTCGGGGTTCTGGCAGCCGTGGCGAGAGCAATATCCGACGCTGCATCCGGTGCCCGAAGGGGGCGGCGGTTTGCCGGGTGCG
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| Amino Acid Sequence |
>2,4-dienoyl-CoA reductase
MTATQYPHLLAPLDLGFTTLRNRTLMGSMHTGLEEKPGGFERMAAYFAERARGGVGLMVTGGIGPNDEGGVYSGAAKLTTEEEALKHRIVTRAVHDAGGK ICMQILHAGRYAYSPKQVAPSAIQAPINPFKPKELDEEGIEKQIRDFVTCSVLAQTAEYDGVEIMGSEGYFINQFLAAHTNHRTDRWGGSYENRMRLPVE IVRRVREAVGPNFIIIFRLSMLDLVEGGSTWEEIVTLAKAIEQAGATLINTGIGWHEARIPTIATKVPRAAFSKVTAKLRGSVKIPLITTNRINTPEIAE QILAEGDADMVSMARPFLADPDFVNKAAEGRADEINTCIGCNQACLDHTFGGKLTSCLVNPRACHETELNYLPVKQIKKIAVVGAGPAGLSAATVAAERG HQVTLFDSASEIGGQFNVAKRVPGKEEFYETLRYFKRKLQTTNVEVCLNTRVDVAKLVEGGYDEVILATGIAPRLPAIPGVDNAKVLSYLDVLLERKPVG KRVAVIGAGGIGFDMSEFLVHEGVATSQDRAAFWKEWGIDMHLEARGGVAGIKAAPHAPARDVFLLQRKKSKVGDGLGKTTGWIHRTGLKNKQVQMLNSV EYLKIDDEGLHIRIGETGEPQVLPVDNIVICAGQDPLRELHDGLVEAGQNVHLIGGADVAAELDAKRAINQGSRLAAEL
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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