Pseudomonas fluorescens SF4c, QS95_RS04180

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas fluorescens strain SF4c contig_4, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
AGTCGATTACCTGTGCACCGAAGAATGGGCCACCACCGCGCACGACATCCTGTGGCGTCGCAGCAAACTGGGCCTGTTCACCACACCGGCCGAGCAAGAG CGACTGGCGGCGTACCTGAACAAGGTCGAGCAGAACCGCAGCAAGATCGAAGCGGCCTGATTCGTTCGTCGCTGAACAAAAAGCCCCTGAATCGAAAGAT TCAGGGGCTTTTTGCATTCAGGCTGAAACAAGGCGTGTCGCAGACGTTCGGTTTTCCGAACGCGACCTGACGGTCAATTCGGTTAACCGGATCAGATCCA CGGAAAAACACCATCACAAAACTTTAATAACGTTATAAATCAATGCATTAACGTGTAGCGACTGGTCTGGCACGACTCATGCTCTACACTCCTTCGACGA ATGCCTGTTGCGCCAACACAACAGGAGCCGTCAGGCATTCGAAGCTCAAAAGGGCCCGCTCAACCGGCTCCATAAAAAAAACAATGTCGAGGAAAATTTG
DNA Sequence for Gene
>QS95_RS04180
ATGCGCATCGTTCCCCATATCCTGGGCGCAGCCATTGCTGCCGCTCTGATCAGCACACCAGTTTTCGCTGCCGAACTCACCGGCACCCTTAAGAAGATCA AAGAGTCCGGCGTCATCACCCTGGGCCACCGTGACGCTTCCATTCCTTTCTCCTACATCGCTGACGCTTCCGGCAAGCCGGTCGGCTACTCCCACGATAT CCAGCTGGCCATCGTCGAAGCGATCAAGAAAGACCTGGACCTGCCAAACCTGCAGGTCAAATACAACCTCGTCACTTCGCAAACCCGTATCCCGCTGGTG CAGAACGGCACCGTGGACGTCGAGTGCGGCTCCACCACCAACAACGTCGAGCGTCAGCAACAGGTCGACTTCTCCGTCGGCATCTTCGAAATCGGTACCC GTCTGCTGTCCAAGGCTGACTCCAAGTACAAGGATTTCGACGATCTGAAAGGCAAGAACGTCGTGACCACCGCCGGCACAACTTCCGAGCGTATCCTCAA GGCGATGAACGCTGACAAGCAGATGGGCATGAACGTGATTTCCGCCAAGGACCACGGTGAGTCCTTCCAGATGCTGGAATCGGGTCGTGCCGTTGCGTTC ATGATGGACGATGCCCTGCTGGCCGGCGAAGCCGCCAAAGCCAAGAAAGCCTCCGACTGGGCCGTGACCGGTACTCCACAGTCGTACGAAATCTATGGCT GCATGATGCGCAAGGGCGATGCGCCGTTCAAAAAGGCTGTCGACGACGCCATCAAGGCGACCTACGCGTCGGGCGAGATCAACAAGATCTACGAAAAATG GTTCATGCAGCCGATTCCGCCAAAAGGCCTGAACCTGAACTTCCCGATGAGCGACGAGCTCAAGGCCCTGATCGCCAATCCGACCGACAAAGCGGCTGAC GACAAGAAATCCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TTTCTGACTAACCTTATCCCCTGAGGAGGCGCCTGCCTTTTCAGGGGATGGTCACTCCCTGCTGGCACTTATTGGAAACACTCGAACCGGTGGCTGTCGA GCCGATCGCGTGTGCCTGATTTTCACAATCAGGGCGGGAACGGAGCTTCCCCAGGCGGGCACTTGTACATCGATCGAATCGAGGGGAGACCCTAATGAAT TACAACTGGGACTGGGGCGTGTTCTTCAAGTCCACCGGCGTGGGCAGCGAGACCTATCTCGACTGGTTCATTTCCGGTCTGGGCTGGACCATCGCCATCG CCATCGTGGCCTGGATCATCGCCCTGCTGCTCGGCTCGCTGCTGGGCATCATGCGCACCGTGCCGAACCGCATCGTGTCGGGCATCGCGACCTGCTACGT CGAACTGTTCCGTAACGTGCCGCTGCTGGTTCAGCTGTTCATCTGGTACTTCCTGGTGCCCGATCTGCTGCCGCCGGATCTGCAGGAGTGGTACAAGCAG
Amino Acid Sequence
>ABC transporter
MRIVPHILGAAIAAALISTPVFAAELTGTLKKIKESGVITLGHRDASIPFSYIADASGKPVGYSHDIQLAIVEAIKKDLDLPNLQVKYNLVTSQTRIPLV QNGTVDVECGSTTNNVERQQQVDFSVGIFEIGTRLLSKADSKYKDFDDLKGKNVVTTAGTTSERILKAMNADKQMGMNVISAKDHGESFQMLESGRAVAF MMDDALLAGEAAKAKKASDWAVTGTPQSYEIYGCMMRKGDAPFKKAVDDAIKATYASGEINKIYEKWFMQPIPPKGLNLNFPMSDELKALIANPTDKAAD DKKS
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site