Strain | Pseudomonas fluorescens strain SF4c contig_4, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GCGTACGTCAACTATTTCCGTTCGATCCCGCTGCTGCTGGTGATCACCTGGTTCTATCTGGCAGTGCCGTTCGTGCTGCGCTGGATCACCGGCGAAGACA CCCCGATCGGCGCGTTCACCTCGTGCATCGTGGCGTTCATGATGTTCGAAGCGGCGTACTTCTGCGAAATCGTCCGGGCCGGCGTGCAGTCGATCCCGAA AGGCCAGATGGGCGCGGCGCAGGCACTGGGCATGACCTACGGCCAGATGATGCGCCTGATCATCCTGCCTCAAGCGTTCCGCAAGATGACCCCGCTGCTG CTGCAGCAGAGCATCATCCTGTTCCAGGACACCTCGCTGGTCTACACCGTGGGCCTGGTGGACTTCCTCAACGCCTCGCGCGCCAGTGGCGACATCATTG GCCGCTCGAATGAGTTCCTGATCTTCGCAGGTCTCGTGTACTTCACCATCAGCTTTGCCGCCTCGGTGCTGGTCAAGCGTCTGCAAAAAAGGTTCGCCGT
|
|
DNA Sequence for Gene |
>QS95_RS04165
ATGATCTCTATCAAGAACATCAACAAGTGGTATGGGGACTTCCAGGTGCTGACCGATTGCAGCACCGAGGTCAAAAAGGGTGAAGTGATCGTGGTCTGCG GCCCGTCCGGTTCGGGCAAGTCGACCCTGATCAAGTGCGTCAACGCACTGGAGCCGTTCCAGAAAGGCGACATCGTGGTCGACGGCACGTCGATTGCCGA TCCGAAGACCAACCTGCCGAAACTGCGCTCGCGCGTCGGCATGGTGTTCCAGCATTTCGAACTGTTCCCGCACCTGACCATCACCGAAAACCTGACCATC GCGCAGATCAAGGTGCTGGGCCGCAGCAAGGAAGAAGCCACCAAGAAAGGCCTGCAACTGCTCGAGCGCGTCGGCCTGTCGGCTCATGCCCACAAGCATC CGGGGCAACTGTCGGGTGGTCAGCAACAGCGCGTGGCGATCGCCCGTGCGCTGGCGATGGACCCGATCGTCATGCTGTTCGACGAACCGACCTCGGCGCT GGATCCGGAAATGGTCAACGAAGTGCTCGACGTGATGGTGCAGCTGGCCCACGAAGGCATGACCATGATGTGCGTGACCCACGAAATGGGCTTCGCACGC AAAGTGGCCGACCGCGTGATCTTCATGGACGCCGGCAAGATCATCGAAGACTGCAAGAAAGAAGAGTTCTTTGGCGACATCAGCCAACGCTCCGAACGCG CGCAGCATTTCCTCGAGAAAATCCTGCAGCACTAA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
DNA Sequence Downstream of Gene |
AAACTGCTGCATTCCCCGACATCCACTGTCGGGGAATGCAGGTGGTTGACCCAAGGCATCTGTGATGAAATGCGACCCCACTCTCTATCGCGCCACGCCG CCATCACTTGCCGTGAAACCCCGTCTGATCCGCCACCTGTTCCTGCCGCCGCTGGTCATCGCTCTGATGATCGGACTGGGTTACATCGGCTTCTGGACCA GTGAACATTTCGGCATCCGCAGCCTCGGCGAAAACGGCCAGCGCCAACTGGAACTGCACGCCCGCGCGGTCGAAAGCGAGATCAGCAAATACACCTACCT GCCCAGCCTGCTGGAGCTCGAATCGAGCGTTTCGCAGCTGCTGGACGACCCGACCCCGGAACACCGGCAAACGGTCAACGATTACCTTGAAGGCCTGAAC CGGCGCAGCCGCAGTCGGGCCATCTACGTCATGGACACCACCGGCCGCGTCATGGCGACCAGCAACTGGCGCGACGTCGACAGCTACCTCGGTGAAGACC
|
|
Amino Acid Sequence |
>arginine ABC transporter ATP-binding protein
MISIKNINKWYGDFQVLTDCSTEVKKGEVIVVCGPSGSGKSTLIKCVNALEPFQKGDIVVDGTSIADPKTNLPKLRSRVGMVFQHFELFPHLTITENLTI AQIKVLGRSKEEATKKGLQLLERVGLSAHAHKHPGQLSGGQQQRVAIARALAMDPIVMLFDEPTSALDPEMVNEVLDVMVQLAHEGMTMMCVTHEMGFAR KVADRVIFMDAGKIIEDCKKEEFFGDISQRSERAQHFLEKILQH
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|