Strain | Pseudomonas fluorescens strain SF4c contig_20, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CCATGCCCTGAAAAAATCCCAGGCCCTGCGCGATCGACGCGACGCCTGGTTTCTCAAGCTGCCGCTGGTGGGCACATTGATGTACAAGTCCGCCGTGGCG CGGTTTGCCCGGACCCTGTCGACTACCTTCGCCGCCGGTGTGCCGCTGGTGGAAGCGCTGGACTCGGTGGCCGGTGCCACCGGCAACGTGGTGTTCAAGC GTGCCGTGCTGCGCATCCGCCAGGACGTCTCTACCGGCATGCAGCTGAATTTCTCGATGCGTTCCACCGGCATCTTTCCGAACATGGCGGTGCAGATGAC CGCCATCGGCGAAGAGTCCGGCGCACTGGACGAGATGCTCGACAAGGTCGCAGGTTTCTATGAGGACGAAGTGGACAACATGGTCGACAACCTCACCAGC CTGATGGAGCCGTTCATCATGGTGGTGCTGGGGGTGATCGTCGGCGGTCTGGTGGTGGCGATGTACCTGCCGATCTTCCAACTCGGCTCAGCGATCTGAC
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DNA Sequence for Gene |
>QS95_RS23080
ATGCCTATCGACGAACTCCTCAGCCTGTATCCGCTGGCCTTTGTCTTCGCCGCGCTGCTGCTGGGGCTGGTGGTCGGCAGCTTCCTCAACGTGTTGATCT GGCGCCTGCCGAAAATGCTCGAGCGCGAATGGCGCCAGCAGGCTCACGATGTACTGGGCCTGCCCGGTGAATCGCCATTGCCCACCTACAACCTGATGCT GCCGCACTCGCAATGCCCGCACTGTGGCCACCGGATCCGTGCGTGGGAAAACATTCCCCTGTTGAGTTACGTGTGCCTGCGTGGGCGCTGTTCAAGTTGC AGCGCACCGATCAGCAAGCGTTACCCGCTGACCGAACTGGCCTGCGGCCTGCTCTCGGCGTTCATCGCCTGGCACCTGGGTTTCGGCTGGCCGGCGTGCC TGTTGATCGTGCTGACCTGGGGCCTGTTGGCCATGAGCCTGATCGACATCGAGCACCAACTGCTGCCTGACGTGCTGGTACTGCCGTTGCTGTGGCTGGG GCTGATCGTCAACAGCTTCGAGCTGTTCGTGCCGCTGCACGACGCCCTGTGGGGCGCGGTGCTGGGCTATATGGCGCTGTGGTCGGTGTTCTGGCTGTTC AAACTGCTCACCGGCAAGGACGGCATCGGTCACGGCGATTTCAAGCTGCTGGCGCTGCTCGGGGCCTGGGGCGGCTGGCAGATTCTGCCGCTGACCATCC TCTTGTCCTCGCTGGTGGGCGCCGTGCTCGGGGTGATTTTGCTCAAGCTGCGCGACCAGAAAACCTCGACGCCGATCCCCTTCGGCCCGTATCTGGCAAT TGCCGGCTGGATTGCCTTGCTCTGGGGTGGTCAAATAACCGGCTTCTATTGGCAGTTTGTCGGTTTGAAATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
ATACCCCTGTGGAAAAACCCTGGATTCTCGGCCTGACCGGCGGCATCGGCAGCGGCAAAAGCGCCGCTGCCCAGCACTTCATCGATCTTGGTGTCCACGT GGTGGACGCCGATCACGCGGCGCGCTGGGTGGTCGAACCGGGCCGCCCGGCGCTGGCGAAGATCGCCGAACACTTCGGCCCCGAAGTCCTGCAGGCCGAC GGCACGCTGGATCGTGCAGCCCTGCGCAAACTGATTTTTGAGGTGCCGGAACAACGGCGCTGGCTCGAAGCGCTGCTGCATCCGTTGATCGCCGAAGAAA TCGCCCATCACCTGGCGCTGGCAAAATCGCCTTATGCGATTCTGGTTTCGCCGTTGCTGATCGAATCCGGGCAATACGCGATGACCCAGCGCATCCTGGT AATCGACGCCCCGCAACAACTGCAGATCGAACGCACCTTGCAGCGTGACCAGACCAGCGAAGAGCAAGTCCAGGCGATCCTCAAGGCCCAGTCCAGCCGC
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Amino Acid Sequence |
>methyltransferase
MPIDELLSLYPLAFVFAALLLGLVVGSFLNVLIWRLPKMLEREWRQQAHDVLGLPGESPLPTYNLMLPHSQCPHCGHRIRAWENIPLLSYVCLRGRCSSC SAPISKRYPLTELACGLLSAFIAWHLGFGWPACLLIVLTWGLLAMSLIDIEHQLLPDVLVLPLLWLGLIVNSFELFVPLHDALWGAVLGYMALWSVFWLF KLLTGKDGIGHGDFKLLALLGAWGGWQILPLTILLSSLVGAVLGVILLKLRDQKTSTPIPFGPYLAIAGWIALLWGGQITGFYWQFVGLK
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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