Pseudomonas fluorescens SF4c, QS95_RS22970

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas fluorescens strain SF4c contig_20, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CTGGACGTGCTGCTCAACGGTTAAACGTCGATCCACAGCCCTTGCACGTCTTCACGGCAAGGGATGGCCGTCAGCGATTGTCCGGCGCAGGGGCCGGCGA CGCATTCACCGTCCTCGATCAGAAACAGTGCGCCGTGGGTGGCACACTGGATCAGGCTGTTGCTCGGGTCGAGAAACTGGTCGGGGTGCCATTCCAGGCC AACGCCCCGGTGCGGGCAGCGATTGAGGTAGACATACGCCTGCCCCGCGCGGCGCACGGCCAACAGTTTTTTCCCGTCGATATCGAAACCGCGACTGCCG CCCTCAACCAGATCGGCGCCCGCGCAAAGAAACTTCATGGCTATCCTCAAGTGTCGGCTCGTGTCCGGATATGTCCGAGCTTGACGTTCAAATGCAAACA ATTATCAAATGGCCGCCTTCGCTCGTGGCGAGGTGATCGCTGCCGAGGATACTTGGCCTGCCGTTCCGATGCCCGGGAAAACCTTTCAAGGAAGCTGTCT
DNA Sequence for Gene
>QS95_RS22970
ATGCGCCTGAGTACCCGCGTTGCCGTGCTGTGTGTCGGACTTTTGGTCAGCCACCAGGCTGCAGCGGCCGAGTTGCCGCAACGTTGGGTCAGCGCCGGCG GTGCCTTGTCGGAGTGGGTCAGTGCGCTGGGTGGCGAGGCCAAACTGGTGGGCGTCGACACCACCAGCCAGCATCCGCAATCCCTCAAGTCCCTGCCGAG CATCGGCTACCAGCGCAGCCTGTCGGCCGAAGGCATCCTCAGCTTGCGCCCGGACATCCTGATCGGCACCGAAGAAATGGGCCCGCCGCCGGTGATCTCC CAGGTTCGCAGCGCCAAAGTGCAGGTGGAATTGTTCTCGGCTCAGCCGGATCTGCCGACACTGGAGAAAAACGTTACTCATCTGGGGCAGTTACTGGGGG CCGAAAGCCAGGCCGCGCAATTGCTGCACAGTTATCAACAGCAACTCGATGCTCAGAAGGCACGTGTAGTTGCGGTGCAATCAAAGCAGAAAGCACCGGG CGTGTTGTTGCTGCTCGGCCATGCCGGCGGCAAACCACTGATCGCCGGCAAGGACACCGCCGCCGATTGGCTGCTGCAACAGGCGGGCGGGCATAACCTC GCGACCCACACCGGTTACAAGCCGTTTTCCGTGGAGTCACTGGCCAGTCTTGATCCTGAAGTGCTGGTGTTCGCTGACCGTGCGCTGAACGGTGAGGCGG CAAAAGCGGCGTTGTTCAAGGAAAACCCGATCCTCAATTCCAGCCGTGCGGCCAAGACCGGCCGTGTGCTGGAGCTGGATCCGACGCTGCTGGTGGGCGG ACTCGGGCCGCGTTTGCCGGCTGCGCTGAAGACTCTGTCTGACGGTTTCTATCCGGCCCCGAGCGGCCAATGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CCACGCTGGTCAAACCCCGTGGCTTGTTTATCGGCCTGATCCTGATGTGTCTGCTGGCGATCTGGTTGTCGCTGGCGCTGGGGCCGGTCAGCCTGCCGTT GTTCGATACCTTGCGCGCTGCGCTGCGCATGATCGGTGTGCCGTTGGCGCCGGACGGGCTGGAACAGGCTGAACTGATTCTCGGGCAGATTCGTCTGCCG CGTACGTTGCTCGGTTTGGCAGTCGGCGGCGTGCTTGCCCTGTCCGGTGTGGCGATGCAGGGGTTGTTTCGTAATCCTTTGGCCGATCCGGGGTTGGTCG GCGTCTCGAGCGGCGCGGCGTTGGGCGCGGCGGTGGCGATTGTCGGTAGTTCGTTTTTTGGCGGATTGCCGGAGTGGTTCGGGCCCTATCTGCTGTCGGT TTGCGCGTTTCTCGGTGGCCTTGGCGTAACAGCGTTGGTCTATCGACTAGGCCGCCGTAATGGGCAGACCAATGTGGCGACCATGTTGCTGGCGGGGATT
Amino Acid Sequence
>ABC transporter substrate-binding protein
MRLSTRVAVLCVGLLVSHQAAAAELPQRWVSAGGALSEWVSALGGEAKLVGVDTTSQHPQSLKSLPSIGYQRSLSAEGILSLRPDILIGTEEMGPPPVIS QVRSAKVQVELFSAQPDLPTLEKNVTHLGQLLGAESQAAQLLHSYQQQLDAQKARVVAVQSKQKAPGVLLLLGHAGGKPLIAGKDTAADWLLQQAGGHNL ATHTGYKPFSVESLASLDPEVLVFADRALNGEAAKAALFKENPILNSSRAAKTGRVLELDPTLLVGGLGPRLPAALKTLSDGFYPAPSGQ
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site