Strain | Pseudomonas fluorescens strain SF4c contig_2, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
ATGCGCAGCGTCGACGGCCGCAGCCTGCCGGTGTCGAAGGTCTTCCTCGACCAGATGGCGGCGGCCCTGAACATTCGCCAGAGCTTCTTCTCGATCAACC CGGCCGAGCCGACCGTGCAGTTCAAGCTGGAGCCGTACACCCTCGATCCGGCGGTGAGCCGTTCCGAGTTCAAGTTCGGCGACAAGACCATGGAGTACCG CCACGGTCCGATCCTGCCCATGAGTTTCAAGTGGCCGACCGATGCTGAAGACGGTCGCACCAGCCTGGTCATGGACAAGATGGCCGGTCGCCCGATCGGC ATCGAGAAGAACTCCGGCCCGTGGTCGCTGTTCCGTCTGTTCGACCTGATGCAGACCGAGTACCTGACCGGTCGCGACGTGCTGGTGCTCAAAGCCGACG TGGGTGGCCTGCGCGCCAACTACCTGCTGACCAGCCAGCGCACGCCGAACCCGTTCGACATGGGCGTGCTGCGTACCTTCCGTATGCCGGTGCAGCTCTG
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DNA Sequence for Gene |
>QS95_RS02160
ATGCTGGTGGCCAGTCCCTGGCGCAGCGCGGCGCGAACCGACCCGGGCAAGGTGCGGTCGCGCAACGAAGATGCCTTCCTCGACACCCCGCAGCATGGGC TGTGGGTGGTCGCGGACGGCATGGGCGGTCATCAGGGTGGCGACATCGCCAGCCAGTTGATCGTCGCCAGCCTGGCTGAACTGCCGCAGCACGAAGATTT CGACGAACGCCTCAAAGCCATCCGCCAGTGCCTGCACTGGCTGAACCGGCGCCTGGGGCAGGAGTTGACCGTCACCGCCGGGCGTCACGACAGCATCATG GGCAGCACCGTCGTGGCGCTGCTGGTGGAAGGCAACCGTGCGGCCTGCATCTGGGCCGGCGACAGTCGTTGTTATATGTGGCGCGGGCAGCGGTTGTATC AGCTGTCGAAGGACCATTCGCTGCAACAGCAATTGATCGACGAGCAGCAGATGAGCGTCGAACAGGCAGCGGCGCACCCGGCAGCCCAGGCCTTGACCCG GGCGGTCGGCGCGGCGGAACAACTGACGCTGGATGTGCTGGAACTCGAGGTCTATCCCGGTGATGTGTTCCTGCTGTGCAGCGATGGTTTGTATCAAGGC CTGAGCAGCGATGCCCTCGGCAACGCCCTCAGCCTGGCGGCGCCGCATGTGGCGCTGGAACGTCTGTTCGACGGTGCCCTGCGGGGCGCCGCCCGGGACA ACCTGACGGCCGTGGTGATTCGCCAATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
CAGAAATCGAATCCTCAGTCGATGACTTGCTGATGAGCGAAGAGCAGGCCAACAACCTGACCTATTTCGCTTTTGCAAAGCAGCACAACGCCGAACCCGC GCTGGCGCCAACCAAGGCCAGCGTCGGCGCACTGCCGGATGTTCTGGCAGGCCGCTACCACCTCGAGCGTCTGCTCGGGGCCGGTGGCATGGGTGCGGTT TACCGGGCCCGGGATCTCCTGCACGAGCAGTTCGGCGATCCCGATCCTTACATTGCGCTGAAAATCCTCAGCGAAGAATTTGCCGAGTCGCCGGATGCCA GTGCCTTGCTCTACAGCGAGTTCGCCCTGACCCGACGCCTGCGCCACGACAACGTGCTGCGACCGCACACGTTCGAAGTGGACACCGATTGCCAGCGGGC CTTCATCACCATGGAACTCATGCGTGGCCTGACCCTGGACAAACTGCTCTGCGAGCGGCCGCTGGGCCTGCCGTGGAAAGAACTGCGCGACATCGCGCTG
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Amino Acid Sequence |
>protein phosphatase
MLVASPWRSAARTDPGKVRSRNEDAFLDTPQHGLWVVADGMGGHQGGDIASQLIVASLAELPQHEDFDERLKAIRQCLHWLNRRLGQELTVTAGRHDSIM GSTVVALLVEGNRAACIWAGDSRCYMWRGQRLYQLSKDHSLQQQLIDEQQMSVEQAAAHPAAQALTRAVGAAEQLTLDVLELEVYPGDVFLLCSDGLYQG LSSDALGNALSLAAPHVALERLFDGALRGAARDNLTAVVIRQ
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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