Strain | Pseudomonas fluorescens strain SF4c contig_2, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GCCGCCGATCCGAAGATCGTCGCTCGCGGTGAAGCCCTGTTCCGTGGCGGCAACCTCGAGAAAGGCCTGCCAGCCTGCACCGGTTGCCACTCGCCGAACG GCGCCGGCAACGCAGCCGCCGGCTTCCCGCACCTGGGTGGCCAACACGCTCAGTACATCGCCAAGCAGCTGACCGATTTCCGCAAGGAAGAAGCCGGCCG CAACAACGACGGCGACGCGATGACCATGCGCACCATCGCCCGCAAGCTGAGTGACGAAGACATTGCGGCAGTCTCCAGCTACATTCAGGGCCTGCACTAA GACACGCGATTCGAGCATTGCGTGCGATGGCCAACGCCTGCCACGTTAACGCTCGATTAATCCGTCGCAGCAAGTATAAAAAGGGTGGCTTTGGCCGCCC TTTTTTGTGGCCGCTGCCGTTACACTACAGAACTCATGCCCGCCAGGATCTGTCTGAAAACAGGTCGCGCGAGGCGACCAAAATTGTCCAGGAGTAAAGC
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DNA Sequence for Gene |
>QS95_RS01195
ATGCGTAATCTGATCATCAGCGCCGCCCTCGTCGCTGCCAGCCTGTTCGGCGTGACCGCCCAGGCCGCCGAAGCCCCTGCTGCCCCTTACGTCGAACTGA GCAACCCGGTGCCGGTCGCCGTGCCTGGCAAGATCGAAGTGGTCGAACTGTTCTGGTATGGCTGCCCGCACTGCTACGCGTTCGAGCCGGTGATCAATCC GTGGGTTGAAAAACTGCCATCCGACGTCAACTTCGTGCGCATTCCTGCGATGTTCGGTGGCCCGTGGGACGCTCACGGCCAGATGTTCCTGACCCTGGAA GCCATGGGCGTCGAGCACAATGTGCATGCTGCCGTATTCAACGCCATCCAGAAAGAACACAAGAAGCTGACCGACAAGAACGACATGGCCGACTTCCTCG CCACTCAAGGCGTGGACAAGGACAAGTTCCTGGCGACCTTCGATTCGTTCGCCATCAAAGGGCAGATCGTGAAAGCCCGCGAACTGGCCAAGAAGTATGA AATCTCCGGTGTTCCAACCATGATCGTCAACGGTAAGTACCGCTTCGACATCGGCTCCGCCGGCGGCGCCGAACAGGCGCTGAAACTGGCTGATCAACTG GTGGCCAAAGAGCGAGCGGCCAACAAGGCAGCCGCCAACTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GCGCGGCAATCGCCATGCGCCGCTGGGGAACCGAACGCGTCGTTGGCCTGCATGATCCGCAGGTCAACGAGCATCACCTGGAATCGACGGGCCTGCCCGC AGACAGCCGTCTGCGCTTGCTCAGCTTCAATATTCAGGTCGGCATCAGCACCGAGCGCTATCGGCACTACCTGACCCGCAGCTGGCAGCATCTGCTGCCG CACCCCGGACGCTCCAGCAATCTGCAAAAGATCGGCAATCTGCTCGGCGACTTCGATCTGGTCGCCCTGCAGGAAGCCGATGGCGGCAGCCTGCGTTCAG GCTACGTCAATCAGGTCGAACACCTGGCCCAGCTCGGCGCCTTCCCCTACTGGTATCAACAACTCAATCGCAACCTTGGCCGACTGGCCCAGCACAGCAA TGGTGTGCTCAGTCGCCTGCGGCCGTGGGCGATTGAAGACCACCCGCTACCGGGCCCAAAGGGACGCGGGGCGATTCTGGTGCGCTTCGGCGAAGGCCCG
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Amino Acid Sequence |
>thiol:disulfide interchange protein
MRNLIISAALVAASLFGVTAQAAEAPAAPYVELSNPVPVAVPGKIEVVELFWYGCPHCYAFEPVINPWVEKLPSDVNFVRIPAMFGGPWDAHGQMFLTLE AMGVEHNVHAAVFNAIQKEHKKLTDKNDMADFLATQGVDKDKFLATFDSFAIKGQIVKARELAKKYEISGVPTMIVNGKYRFDIGSAGGAEQALKLADQL VAKERAANKAAAN
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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