Pseudomonas fluorescens SF4c, QS95_RS21100

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas fluorescens strain SF4c contig_17, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
ATTGATCGCCAAGACCTGATGCTGAACCATGGTGCGCAGCGCCACCAGCCCGACACTGGTCAGCAGCACGAGGCCGATGCCCCACAGCACGCGGCTCTCC TGGCCATTTGCATCACCGCCGGCCTGCCAGGTCGAGAGCAGATCCACGACCTGACCCAGAAAGGAAAACAACCAGGCCTCGTAGATCGACACACCGGCAC TGAGCAACGCCAGCGCGAGGATATAACCGCGAGCGCCACGGGTGCAGGCCCACAGGAACCGCGCCAGACCGACCGGCGGTGGCGGCGCTTCGTCGGGCGG GAAGGGGTCGAGCCGTTGTTCAAACAGGCGAAGCATTGGGGGTCTCCGAATTCATCAGTTGCGGGGATTCTGCCACTTATCGATCACATTGAGGGGCTGC AGGTTCAGTGCATGATCTTTTGAGGGAAAACCCTCATTGTTGTAACGCTGACGCCTTACTAGCATGAACTCCGACGTTGACCCACTCGATGGAGAGCACC
DNA Sequence for Gene
>QS95_RS21100
ATGGCTACCACGCAGACTGACGACAAGCGCCCAACCCCCGATCCGGCTGAGGACAACGCGTTTTTCCCCTCGCCGTATTCCCTCAGCCAGTTCACCTCAC CGAAATCCGATCTCAGTGGTGCCGAGTACCCCAATCGCTACAAGGGCGGGCGCTGGAAGATCCTGATGATCGGCGCGGACGAGCGCTATCTGTTGACCGA CAACGGCACCATGTTCTCCACGGGCAATCACCCGGTTGAAACCCTGCTGCCGATGTATCACCTGGACAAGGCCGGATTCGGCTTCGACGTCGCGACGCTG TCGGGCAATCCGGTCAAGTTCGAATTCTGGGCCATGCCCTCCGAAGACGCCGAAGTGAAGGGCTTCTACGAGCAATACCGCGATCAGTTCAAGCGTCCGC TCAAGCTGTTCCAGGTGATCGAAGAAGCGCTGGGCGAGGACTCGGATTACATCGGCGTGTTCATCCCCGGCGGGCACGGTGCGCTGATCGGCCTGCCGGA AAGCGAGGACGTGAAGAAGGTCCTGCAATGGGCCGTCGCCAAAGACAAATTCGTCATCACTCTGTGCCACGGCCCGGCGGCGTTGCTGGCGGCCGGCCTC GGTGAAACAAAAGACTCATGCATCTTCAACGGTTACCGGATCTGCGCGTTTCCCGATGCGCTGGACGCGACAACCCCTGACATCGGTTACATGCCCGGCC ACCTGACCTGGAAGTTCGGCGAGCAGTTGCAGGCGCTCGGTGTGGAAATCACTAACCAGGACATTTCCGGGGCCACGCTTCAGGATCGCAAACTGCTGAC CGGTGACAGTCCGCTGGCGGGCAACGCACTGGGCAAACTGGCGGCGGCCGCGCTCCTCAAAGAGGTGACGTCGGGGTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GCTCCGGACCTGCCGAGGCACTCTTGCGCGCCGCCCTCGACATCGAGGCGGCGCCCACGCTAGTGGCGATCCAGAAGGCCGTTCGCGGTTTTGCCGGGGC CTATGGTTACGATCGGTTCGTCCTGTTCTCCGCCACCTCGGCGTCGGAGGACGTGGTCGAGCGCATTTACTGGGTGGAGGGCGACTGGTTTGGTGATGGC ACTGGCGTCGACGCCGAAACCTACGTTCAGCGCTGCCCAGTAACTCGCCACCTGTTGGACGCCCGCGAATCGTTCTTCTGGAGCAAGGTGCAGGAGGAGA GCGGCGAACTTTATCGGCTGGTTCGCGTGCCCAGTGGCCCGGGCGTGCATGGATTGCAGATTCCGGTCTTCGGCCCGCAAGGGCTTGAAGGCGCCATGAG CCTGGGAGGCGAACAGATCGATGCCTCGGCGCGGGTTCGTCTGGCGTTGGGCATGCTCGCCACGGTGGCGTTTCACTCGGCACGACGCTTGCTCGAAGCG
Amino Acid Sequence
>chaperone protein HchA
MATTQTDDKRPTPDPAEDNAFFPSPYSLSQFTSPKSDLSGAEYPNRYKGGRWKILMIGADERYLLTDNGTMFSTGNHPVETLLPMYHLDKAGFGFDVATL SGNPVKFEFWAMPSEDAEVKGFYEQYRDQFKRPLKLFQVIEEALGEDSDYIGVFIPGGHGALIGLPESEDVKKVLQWAVAKDKFVITLCHGPAALLAAGL GETKDSCIFNGYRICAFPDALDATTPDIGYMPGHLTWKFGEQLQALGVEITNQDISGATLQDRKLLTGDSPLAGNALGKLAAAALLKEVTSG
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site