Strain | Pseudomonas fluorescens strain SF4c contig_13, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CTGGGAAACCGCACGTCGTCGCACGCCAGGCAATGACTGGGTGATCGTCGCGCTGGGCCACCCGGGCGAGATCGAAAAAATCATCGTCGACACCCTGCAC TTCAAGGGCAACTACCCGGACACCTGCTCGATCCAGGGCGCGTTCGTCAAGGGCGGCACCGACAGCCAGATCGAAACCCAGTCGCTGTTCTGGCGCGAAC TGCTGCCAAGCCAGAAGCTGGAGATGCACGCCGAACACACCTTCGTCGAGCAGATCAAGGCACTGGGCCCGATCACCCACATCCGTCTGAACGTGTTCCC GGATGGTGGTGTGAGCCGCCTGCGCGTTCTCGGCAAGGTCGCGAAGTAACACCCGATCGTTCCCACGTCGAGGCGTCGAACCGTCTGCGTGGGAATGCAT ACCGTGACGCTCCGCGTCACAGTGGACGCGGAGCGTCCATGGCAGCGTTCCCACGCAGAGCGTGGGAACGATCAATTTTCAAGAGATTAAGAAGAACAGC
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DNA Sequence for Gene |
>QS95_RS17520
ATGCGCACACTGACGATTGAACCGCTGACCAAAGAAGCCTTCGCCCCTTTCGGTGACGTGATCGAAACCGACGGCAGCGATCACTTCATGATCAACAACG GTTCGACCATGCGCTTCCACAAACTGGCGACGGTCGAGACCGCGACGCCTGAGGACAACGCGATCATCAGCATCTTCCGCGCCGACGCGCAGGACATGCC GCTGACCGTCAGCATGCTGGAACGCCATCCGCTGGGCAGCCAGGCTTTCATTCCGCTGCTCGGCAACCCCTTTCTGATCGTGGTCGCGCCACTTGGCGAT GTACCTGTATCAGGCTTGGTCCGCGCCTTCGTCACCAACGGCAGGCAGGGCATCAATTACCATCGCGGCGTCTGGCACCACCCGGTGCTGACGATCGAAA AGCGGGATGACTTCCTGGTGGTTGATCGCAGTGGCACAGGCAATAACTGCGATGAGCATTTTTTCAAAGAGGATGAGCGTTTGATCCTCGCCCCCCACCA ATAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GAGAAGGTCTGATCACTCGACAACAAGAGTGACAGGCGAGAGGTAAAGACTGTGGAAGCACATCTGTTGGAATGGCTGAACCTGAGCGTGCGCTGGGTTC ACATGATCACTGGCGTGGCCTGGATCGGCGCGTCGTTCTACTTCGTCTGGCTGGAGAACAACCTCAACCGCGTCAATCCGAAAACCGGTCTGGCCGGTGA TCTGTGGGCGATCCACGGCGGCGGTATCTATCACCTGGAAAAATACAAACTGGCCCCTCCGTCGATGCCGGAGAACCTGCACTGGTTCAAATGGGAAGCC TACTTCACCTGGATGTCGGGGATCGCGCTGCTGTGCGTGGTGTTCTACTCCAACCCCGTGCTCTACCTCGTGGCACCCGGCAGCGGCCTGACCGGCCCTG AAGGCGTGGCCATCGGCATCGGTTCGCTGATCGCCGGCTGGTTCATCTACGACTTCCTCTGCGATTCGCCTCTGGGCAAAAAACCTGCCCTGCTCGGCTT
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Amino Acid Sequence |
>ureidoglycolate hydrolase
MRTLTIEPLTKEAFAPFGDVIETDGSDHFMINNGSTMRFHKLATVETATPEDNAIISIFRADAQDMPLTVSMLERHPLGSQAFIPLLGNPFLIVVAPLGD VPVSGLVRAFVTNGRQGINYHRGVWHHPVLTIEKRDDFLVVDRSGTGNNCDEHFFKEDERLILAPHQ
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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