Pseudomonas fluorescens SF4c, QS95_RS17215

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas fluorescens strain SF4c contig_13, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GTCGGCCTGATGCAGCCGTGGCGCTTCATCCGCATCAGCGACCGCGCTCTACGTGGCCAGATCCAGAACCTTGTTGAAGAAGAACGCGTGTGTACCGCCG AAGCCCTCGGCGAGCGCAGCGACGAATTCATGAAACTCAAGGTCGAGGGCATCAACGACTGCGCCGAAGTATTGGTTGCCGCGTTGATGGACGATCGCGA AAAACACATCTTTGGTCGTCGCACGCTGCCGGAAATGGACATGGCCTCATTGTCCTGCGCGATCCAGAACCTGTGGCTGGCCGCGCGTGCCGAAGGCCTG GGCATGGGCTGGGTGTCGCTGTTCGAGCCGCAGGCGCTGGCCGATCTGCTGAAACTGCCGGCCGGGGCCAAGCCGCTGGCGGTGCTTTGCCTGGGGCCGG TCAAGGAATTCTATCCGGCGCCGATGCTGGTACTCGAAGGGTGGGCGCAGGCGCGTCCGCTCAATGAGCTGCTGTATGAAAATTTTTGGGGAGTGAGTCA
DNA Sequence for Gene
>QS95_RS17215
ATGAGTGTGGCGTTGTTGAGTGTCGCCGCGGTTGCGCTGGATGCGCTGCTGGGTGAACCGAAACGCTGGCATCCGCTGGTGGCGTTCGGTAATTTCGCCG GGCGCATCGAGCAACGTTTCAATAGCGGCGGTCGCGGCTGGCGTAGCCATGGCGTCACCGCGTGGGTGATCGCGGTGTTGCCGCTGACCCTGCTGGCCAC GGCGTTTTCCTGGGCGCCTTACGTGGGCTGGATCGTCGAGATTCTCGCGCTGTATTGTGCCCTCGGCATGCGCAGCCTGGGTGAGCACGTCGAGCCGGTG GCCAAGGCTTTGCGCGCCGATGATCTGGCAGAGGCGCGCAAGCGTGTGGGTTATCTGGTCAGCCGTCAGACCGATGAGCTGGACAGCACCGCCGTCGCCC GCGCCGCCACCGAGTCGGTGCTGGAAAACGGCAGCGATGCGGTGTTTGCCGCGCTGTTCTGGTTTGCCGTGGCCGGTGTGCCGGGCGTGGTGCTCTACCG TTTGAGCAATACGCTCGACGCGATGTGGGGCTATCGCAACGAGCGTTTCGAGCGTTTCGGCTGGGCGGCGGCAAAAATCGACGACGTCCTCAACTACATT CCTGCGCGGCTGGTAGCGTTGACCTACGCGCTGCTCGGCAAAACCCGACTGGCGTTGAAATGCTGGCGCACTCAGGCGCCGAAATGGGACAGCCCGAACG CCGGCCCGGTGATGGCCGCCGGCGCGGGTGCCTTGGGCGTCGAACTCGGAGGCCCGGCGATTTACCACGGCGAGCTGCACGAGCGTCCGCAACTGGGCGA GGGCGCGCCGGCGGATGCCGATTCCATTGATCGCGGCTGGCAATTGGTCCAGCGCGGGGTATGGTTATGGCTGCTGATTCTCTGCGTGGGGGCTGAATTC TATGCTTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GCACGGTGGCCGGTTGCGCAGGGCGGCGCTCGAGTACGGCATCGCGGAAGAAGACTGGCTCGACCTGTCCACGGGTCTTGCGCCGTGGCCGTTTCCGGTC CCGGAGATTCCGCTGCGGGCGTGGGCGCGCCTGCCGGAAAACGATGACGGTCTGGAGCAGGCCGCCTGCGATTACTACGGCGCCAGCCAGGTGTTGCCGG TGGCCGGTTCGCAGATGGCCATTCAACTGCTGCCGCGATTGCGCCGCGCCGGTAAGGTCGGTGTGCTCTCACCGTGTTACGCCGAGCATGCCGAAGCCTG GCGGCGCAGCGGCTATATCGTGCGCGAGGTGCTGGAGCAGGAAGTCGACTTCTTTCTCGACAGCCTCGACGTGTTGGTGGTGGTTAATCCAAACAATCCC ACGGGCCTGAATCTGACCCCGGCGCGCCTGCTCGACTGGCATGCGCGGCTGGCCCAGCGCGGCGGCTGGCTGGTGGTCGATGAAGCGTTCATGGACAACA
Amino Acid Sequence
>cobalamin biosynthesis protein CobD
MSVALLSVAAVALDALLGEPKRWHPLVAFGNFAGRIEQRFNSGGRGWRSHGVTAWVIAVLPLTLLATAFSWAPYVGWIVEILALYCALGMRSLGEHVEPV AKALRADDLAEARKRVGYLVSRQTDELDSTAVARAATESVLENGSDAVFAALFWFAVAGVPGVVLYRLSNTLDAMWGYRNERFERFGWAAAKIDDVLNYI PARLVALTYALLGKTRLALKCWRTQAPKWDSPNAGPVMAAGAGALGVELGGPAIYHGELHERPQLGEGAPADADSIDRGWQLVQRGVWLWLLILCVGAEF YA
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site