Pseudomonas fluorescens SF4c, QS95_RS11595

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas fluorescens strain SF4c contig_10, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CCTTCACAACGCTGAACAGGCTCAGCCCACTGAAGAAGGAATTGCCGTCGTGGGGAATATCAAAAAAGCCTTTACCTGCCTTCTGCTGATCGGATCAGCC GCCAGCCCCTTTCTCAGTTTCAACGTTCAGGCCGAAGGCAATGGCGTGATCGTGCTCAATCGTGATGTCCAGCCGATCCCGATCGGTCGCAGCGGTGGCA AAGATCCGTACCCCACCACCGTCAATGCCAACCCGTCTGCCCGCATCAATTCGACACTCAGCAATACCGAACTCAGTGATGGTGACTTTGCCCGTGTAGC CAGCGGCTCTTCCATCCGCGGCAACATCAACACCCCCAGCTCGAACCTGCCCGGCATGAACAACCTGACCAACCAGAACGGCCTGCCCGGCATGAGAGGC GGTCATGGCGGCGGTGCCGGCAGCTCGATTTCCAATACCGTAAACCGCGCGATGAGTTCCGGTCTCGCTCCGTTGACCCGCATGGCTGGAGGCCAGTGAC
DNA Sequence for Gene
>QS95_RS11595
ATGAATCGTTCCCTGCTCCTGCTTGCCCTGCTCGGCTGCTCCAGCGTGATGGCCGATCCCAGCGCTGTGAACAACGCGAACATTCAAGACTCCGGTGCTC AGTACCGCGGCAACTTCAACGTCAACCAGGCCGCTGGCGATCAGATGCAGCAGGCCAACGTCAAGGCGATTGCCATTGGCACCGAGTCCCACGCCAGGAC CAGCGTGCAGCAGAAAATCGACACCCCCGCCGACCGCTCGATCAACGCGAGCGCCAACATCGGCGGCACCTCTTTCAGTAACGGCAACGGGATCCTTGGC GTGAACCAAGGCGCCGGGGCCAACAACCAGATGGCCAACGTCACGCGCGTCAGCATCAGTGCTGGCCCGCAGGCCGTTGACGATAGCGCCCTTTCCCAAC AGAACGTGGCGTTGTTACCGAGCTCAGGAGCAACTGGCACCTCACCCGGCAGTCGCCAGGTCACGACAAGTGATCAGGCCTTCACCGGCAGCCGAGGGGT AATCCAGGTGAACCAGAGTGCCGGGGTGGGGAACCGAATGGCTAACACCCTGAGCATCCGGGTCGCTGACTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CCCAAACAACAAAAGCAGTGCAATTAGAAAGTACCAACACTTAACCAACTAATAAGCACGGAGAAACACCATGAAACCTACAATGGCCCTCAAACCACTG GTTTTCGCACTCGCAGCAGTGATGGCAATCGCAGCACAGGCAGGCGGTCGTGATGATGATCGCGGTCATGGTAACGGGCACGGCAACGGTCATGGCAACC ATGGTCCGAAAGGCCCAACCCTGGAACAACTGCTGCAAATCACCGCCGGCGCCGGCGCTGCAGTGCTCGATGCACAAAACAGCGATGGCAACGTGGTGAA AAACCAGGGCACCGTCAACAATGCCAACGCCAGTGACTCGCTCAATGGCTCCAACGGCAACATGGGCGCCAACGTTGCAGCCGGTGACGGCAACCAACAA GACAACGCCGCCGCCCTGGCCACCGCCGACGAAAGCTTCATCTTCGGCACCGCTGTTGCTGCCTCGAGTGCCACTCAAGTCAACAACAACAACTATGTGA
Amino Acid Sequence
>autotransporter adhesin
MNRSLLLLALLGCSSVMADPSAVNNANIQDSGAQYRGNFNVNQAAGDQMQQANVKAIAIGTESHARTSVQQKIDTPADRSINASANIGGTSFSNGNGILG VNQGAGANNQMANVTRVSISAGPQAVDDSALSQQNVALLPSSGATGTSPGSRQVTTSDQAFTGSRGVIQVNQSAGVGNRMANTLSIRVAD
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site