Pseudomonas fluorescens SF39a, NX10_RS13050

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas fluorescens strain SF39a contig_8, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CGTGTAGCGCAGGCTGCTGCCTCTGCCAACCAGTCCTCGACTGGCCTGGTCGTGGAAAACAAAGGCGTGCAGGCTTACAAAACCGACACTCTTACCGGTA CTTATGCAGCCGCTGGCGTATTCAAAGCCAAAGGCACCGCGACCATCGAAGACGACAACAACCATGGCGGTTGGGGTAACCGTGGCGGCGGCCACGGCGG CAACGATGATCAGAAAGCCAAGTTCGAAGCCGTGGGCAGTTTTGGCCTCGCTGGCGTCACCACCCAACAAGTGCTGACCAAAGATGGCTGGAAAACCCCA GTCGTCAACAATGCCAACATGACCAACTCGATGAACAACTTCTCCGGCAACGGCGGAGCCAACGTCTCGGCGGGTGTGGGCAACCAACAAAGCAACTCGC TGTCCATCGCCGCAGGTTGCAAAGCCTGCATGTAATCGCGATCGAAACGAAAGCCCCGGCAACGGGGCTTTTTCCCAGGTTCCACAAGGCGTATTCGATC
DNA Sequence for Gene
>NX10_RS13050
ATGCGGACTCCTGCCCTCCTCGCTCTGCTTTGTCTGTGCGGCCTGACTCAGGCAGCCCAGATGCCGGTCGCTGCCCTGCCGGGTGGCGTGCTGGTCTACA AGGACGTGCAAAGCATTCGTGAGCGCAAGTTTGCCGACATCGTCGAACAGAAAACCGATTTCAGCTGCGGCGCTGCTGCACTGGCAACGGTCCTGCGCCA GGCCTATTGGCTCGACGTCGATGAGGAGCACATCATCAAGGGCATGCTGGTCAACGCTGACCAGGACCTGGTGCGAACCCAGGGTTTCTCCATGCTCGAC ATGAAGCGCTACGTAGAAAGCATCGGCATGCGTGCCCGTGGCTACCGGATCCCGCCCGAGAAACTCGAAGCGGTGACCATTCCGGTGGTGGTCCTGATGG ACATTCGCGGCTACAAGCATTTCGTCGTCCTGCAGCGTTCGGACAAGGATTGGGTCTATATCGGTGACCCGGTTCTCGGCCACAAGCGCTACAAACACGA TGACTTTGTCAAAGGTTGGAACGGCATTGTCTTTGCCATCGTCGGCCCCGGTTATGACAAGGCCAACGCCTTGCGCAGCCCTCCCGTGCCGCTGACGGCG AAGAATTCGCTGGACGGTTTCAACCCGGTCAAAGATGCGGAATTGATGGATTTCGGATTCATTCAGAGCGACTTCTTTTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TCGCCGAGTTAGAGAATGGGACTGGATGTCCCGGGAGCAGCAGATGAAAAGCTCATACTGGCTGGCCGCCGCCTGCCTGGCAGCGAGTGCGTCAGGCTTT GCCCATGCCGGATTCAAACCCATCGAAATCAAGGACCAGGAGCTCGCCGAGCTTCGCGGTCGGTACGTCATGCCGGGGCGGATCATCAGCTTCGGCATTG TCATGAGCAGCACCTGGCGCAACGCCAGCGGCGATTTGATCGGTGCAGCCACCTCGATGCAGGTCCAGGCTGCAACCGTCAAACCGGAGTTTTATGTCTC GACCATCAAGGAGTCGGGCAACGGCAGTACGCCCACATTGGGCACCGGCACTGTGATTGGTGGCGCCGGCCTCAACAGCAGCCAGGGCGTGACGCAAAGC GTGCGTGCGGCCGGCGATGGCAACACCGCCAATAACAATGTCGCGATCAACGTCAGCGAAGCCAGTCAGGCGCCGGCACTGGTGCCGTCGCAAGGCCAGG
Amino Acid Sequence
>peptidase C39
MRTPALLALLCLCGLTQAAQMPVAALPGGVLVYKDVQSIRERKFADIVEQKTDFSCGAAALATVLRQAYWLDVDEEHIIKGMLVNADQDLVRTQGFSMLD MKRYVESIGMRARGYRIPPEKLEAVTIPVVVLMDIRGYKHFVVLQRSDKDWVYIGDPVLGHKRYKHDDFVKGWNGIVFAIVGPGYDKANALRSPPVPLTA KNSLDGFNPVKDAELMDFGFIQSDFF
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site