Pseudomonas fluorescens SF39a, NX10_RS25470
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas fluorescens strain SF39a contig_33, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CTTGCACCTGCGGGACGGCGGCGAAGAGGCTGAGCAAGCCAAGCAGGCTCAAAGCTGACCAGCGCATGGCTGAATCTCCTGAATTCCAGTCATTGATACA CGCAGCTTGGCCGAGCGCGACGCCGATTGCCAGCCCGGCAGTTTTGCGCAGAACTTGACCTTGCCATCGTGGCAAGCTCGAGACTGCCGGCAACCTCACT CAAAGGAGTCTTCCCATGCAAGTGTTCAACGTTCAAGGCATGTCCTGCGGTCATTGCGTCAAAGCCATTACCACTGCGGTGCAGGCGCTGGATCCGGCGG CCAGTGTGCGAGTCGATCTGGCGGCCAAGGAAGTCGGCGTCGAAAGTGTGCTTAGTGCCGACCAGGTGATCGAAGCGATTCGCGAAGAGGGTTATGAGGT GAAACTCGTCTGAAATTGATCGTTAGCGAGCTATCGGAATGTTCAAGGCGTCCGGGCGCGGCTAGACTGTCGGGCTGCGACTTGCCCACCTGGATGCCTG
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| DNA Sequence for Gene |
>NX10_RS25470
ATGAACTTCCGCACGATTTTGATACTCGGCGCCTTGAGCGCCTTCGGTCCTTTGGCGATCGACTTCTATTTACCTGCCTTCCCGGCCATGGCGTCGGCGT TCGGCACCGATGAGCAGCATGTCCAGCTGACGCTGGCGGCGTACTTCCTCGGTTTGTCGCTGGGCCAACTGGCGTACGGGCCGATTTCCGATCGTTTCGG TCGACGGCTGCCGCTGCTCAGCGGCGTTGCCCTGTTCACCCTGGCGTCCTTGGCCTGCGCCTACGCGCCGAGCCTGGAATGGCTGATCGGCGCGCGTTTC GTCCAGGCATTGGGCGGTTGCGCGGGGATGGTGATTTCCCGTGCGGTGGTTGCCGACAAGTGCGACGCGGTCGGCTCGGCGAAGGTGTTTTCGCAACTGA TGCTGGTGATGGGCCTGGCGCCGATTCTGGCGCCGATGCTCGGCGGTCTGCTGGTCAACACCACGGGTTGGCAGTCGATCTTTCTGGTGCTCACCGGGTT CAGTGCGGCGGCAGGTCTGGCGGTGGCATTGGGGCTGCCGGAAAGCATGCCGGCCCACGTCCCGCGCCAGCCGTTGTCCGGTGCATTGCGCCAGTACGCG CGACTGGTAAAGGACTCGGTCTATCTCGGCCATGCCCTGACCGGCGGCATCGCCATCGCCGGGATGTTTGCCTACATCGCCGGTTCACCGTTTGTGTTCA TCAAGCTCTACGGCGTACCGGCCGAGCATTTCGGCTGGCTGTTCGGCACCAACGCGGCGGGCTTCATTCTGGTGGCGCAGGTCAATGCGCGCCTGCTCGC CAAGCGCGGCCCGGCGTTTTTGCTGGTGCGCGCGGTGTGGGTGTATTTCCTCGCCGGACTGACATTGCTGGCGGTCAGCTCAATGCGTCCGGATGCGCTG TGGCCGTTGCTGATTCCGCTGTTCATTTGCATCGCCAGCCTCGGCTGCATCATTCCTAACGCCTCGGCTTGCGCGATGAACGGTCAGGGCGCACGCGCCG GCAGTGCGTCGGCGATGCTCGGTTGTCTGCAATTCAGCATCGCCGCCGGTGCCGCCGCCTTGGTGGGGGTGTTGCACGATGGCAGCGCCGTGCCGATGGC CATGGTCATCAGCCTGTGCGGTCTGCTGGTGGTGAGCGTTGCGCTGCTCACCCGGCGCTTGCAGAATGCCCGGGCGCTGGCGCTAGCCCAGGTCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GCGCTCGACTCTGGACCTCAGCCAGCGGCGCGCTGTTGGCTGGGTTCGGGGATCCGGTGGGGCGCGCAGAGTCGCGCTTCGAGGGTGCGAGTGAAGGCCA GGGCCTCGGCTTCACTGCGAAAGGTCACGACATGCTGGTCCAGGCGCACCTGCCATTGAGACGTTGCCACTTCTTTTATCAGGATCTTCATTGCTGACCT CCCTTGCGTAAAAGATGTATCGCAGAGGCTTCGATTGTAGACCTCGATACCCGCGTAATTGTGACAAGGGTCAGGCAACCGACTGACGGCAAAAAGCCCC GCAACCGCTCTGGCATCACCAGCGATTGCGAGGCTTTATTTTTTAGAAACCTTCTAAAACAATTTTCCCCTTGGCCTTGCCGCTTTCCAGCAGTTCATGG GCGCGGCGCAGATTGGCGGCATTGATCACGCCGAAGTGCTCGCCCAGGGTGGTCTTCAAGGTGCCGGCGTCGATCAGCTCGGCGACGCGGTTGAGCAGCT
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| Amino Acid Sequence |
>Bcr/CflA family drug resistance efflux transporter
MNFRTILILGALSAFGPLAIDFYLPAFPAMASAFGTDEQHVQLTLAAYFLGLSLGQLAYGPISDRFGRRLPLLSGVALFTLASLACAYAPSLEWLIGARF VQALGGCAGMVISRAVVADKCDAVGSAKVFSQLMLVMGLAPILAPMLGGLLVNTTGWQSIFLVLTGFSAAAGLAVALGLPESMPAHVPRQPLSGALRQYA RLVKDSVYLGHALTGGIAIAGMFAYIAGSPFVFIKLYGVPAEHFGWLFGTNAAGFILVAQVNARLLAKRGPAFLLVRAVWVYFLAGLTLLAVSSMRPDAL WPLLIPLFICIASLGCIIPNASACAMNGQGARAGSASAMLGCLQFSIAAGAAALVGVLHDGSAVPMAMVISLCGLLVVSVALLTRRLQNARALALAQV
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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