Pseudomonas fluorescens SF39a, NX10_RS07370 (argJ)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas fluorescens strain SF39a contig_3, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CATCCACCTGCGTGGCTATGCGCAGAAGAACCCGAAGCAGGAGTACAAGCGCGAATCCTTCACGCTGTTCTCCGAGCTGCTCGATTCGATCAAGCGCGAC TCGATCCGTGTGCTCTCGCACGTTCAGGTACGCCGCGAAGATCCGGAAGCCGAAGAACAACGCCTGCGTCAGGAAGCCGAAGCACTGGCGGCGCGCATGC AGTTCGAACACGCCGAAGCGCCTGGGCTGGATCAGCCGGAAGCGTTGGGTGAAGAGGTCGATGTGGCCCTCGCCACCGCCGCTGCCCCGGTTCGCAACGA GCAGAAGTTGGGCCGCAACGAGCTGTGCTACTGCGGTTCGGGCAAGAAATACAAGCATTGCCACGGGCAGATCCAGTAAAACCCGTTTCAATCGCTGAAC ACCCGCGCCGCGACCGGCTCCTGCCGTCGCGGCGTTTTGCCATTTATCCCACCGTCCTTTCCCGTGGCGGTGCTGACATCATTGAGTAAGGAGCGCATTC
|
|
| DNA Sequence for Gene |
>NX10_RS07370
|argJ
ATGGCTGTTGGTCTTGGTCCTTTGCCAACGTTGCACCCGGTTGCCGGTTTTGAACTCGGTATCGCCTCGGCCGGCATCAAGCGCCCGGGGCGCAAGGATG TGGTGGTGATGCGCTGCGCTGAAGGTTCGACCGTGGCTGGCGTGTTTACCCTGAACGCGTTCTGCGCCGCGCCGGTGATCCTGGCGAAAAAGCGCGTGCA CAATGCCGTGCGCTATCTGCTGACCAATACCGGCAATGCCAACGCCGGTACCGGCGAGCCTGGTTTGGCGGCTGCCGAGCGCACCACCGCTAGGTTGGCC GAGCTGACCGGCGTCGATGCCAGCCAGATTCTGCCGTACTCCACTGGCGTGATCGGCGAGCCGCTGCCGGTCGAGAAGATCGAAGGCGCACTGCAAGCCG CGCTGGACGACCTGTCGGAGAACAACTGGGAAGCCGCCGCCACCGGGATCATGACCACCGACACCCTGCCGAAGGGCGCCAGCCGCCAGTTCGAGCATGA CGGCGTGACCATCACTGTTACCGGCATCAGCAAAGGCGCCGGCATGATTCGGCCGAACATGGCGACCATGCTGGGTTACATCGCCACCGACGCCAAAGTC TCCCGCGAGGTGCTGCACAATCTGATGCTCGACGGCGCGAACAAGTCGTTTAACCGCATCACCATCGACGGCGACACTTCGACCAACGACTGTTGCATGC TGATCGCCACTGGCAAAGCCGCGTTGCCGGAAATCACCCGCGCTGAAGGCGAGCTGTTCGCCAAGTTGAAGCAGGCGGTGTTTGAAGTGTGCATGGACGT AGCCCAGGCCATCGTGCGCGACGGCGAAGGCGCGACCAAGTTTGTCACCGTCGAAGTGAATGGCGGCGGCAATCATCAGGAATGCCTGGACGTCGGCTAC ACCGTGGCCCATTCGCCGCTGATCAAGACTGCGCTGTTCGCCTCCGACCCGAACTGGGGTCGAATCCTTGCCGCCGTCGGCCGTGCCGGTGTCCCGGACC TGGACGTGAGCAAGATCGACGTGTTCCTCGGCGACGTGTGCATCGCCAGCCGTGGCGCCCGCGCCGCGACCTACACTGAAGCCCAGGGCTCGGCCGTGAT GCAGCAGGAAGAAATCACCATCCGCATCGAACTGGGTCGCGGCGATTGCAGCGAAACCATCTGGACCACCGACCTGTCGCATGAGTACGTAAAGATCAAC GCTGAATACCGTACCTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
CCTGATCAGGGACCGAGTCGCTCGATTCGCGAGCAGGCTCGCTCCCACAGGGGATTTTCGCTGCAGCTCGGTCCATTGTGGGAGCGAGCCTGCTCGCGAA AGCGGCGGTCCAGACACATCAAGTCACCAGCATCCCACTGACGAAAAGGCGCCACACCATGTCCCTGCACCTGATCATCGGCGACAAACTGCTTTCCTCC TGGTCCCTGCGCGCGGCACTGGCGCTCGACCTGACCGGCGCACCCTATAGCGAAGAGCTGATCAAGCTCGGCAAGCCCGACACCCGCGAGCGCCTGCTCA AGCATTCGCCTACCGGCAAGGTGCCGCTGCTGCAAACCACCCGTGGCACCATCGCCGATTCGCTGGCCATTGCTGAATACCTCGCTGAGCAGTTTCCGTC CGAGCAACTCTGGCCGAGCGATACCTTCGCCCGCGCCCAGGCCCGCTCGGCCTGCGCACAAATGCACAGCGGCTTCTTCGCCATGCGCAATCACATGCCG
|
|
| Amino Acid Sequence |
>ornithine acetyltransferase
MAVGLGPLPTLHPVAGFELGIASAGIKRPGRKDVVVMRCAEGSTVAGVFTLNAFCAAPVILAKKRVHNAVRYLLTNTGNANAGTGEPGLAAAERTTARLA ELTGVDASQILPYSTGVIGEPLPVEKIEGALQAALDDLSENNWEAAATGIMTTDTLPKGASRQFEHDGVTITVTGISKGAGMIRPNMATMLGYIATDAKV SREVLHNLMLDGANKSFNRITIDGDTSTNDCCMLIATGKAALPEITRAEGELFAKLKQAVFEVCMDVAQAIVRDGEGATKFVTVEVNGGGNHQECLDVGY TVAHSPLIKTALFASDPNWGRILAAVGRAGVPDLDVSKIDVFLGDVCIASRGARAATYTEAQGSAVMQQEEITIRIELGRGDCSETIWTTDLSHEYVKIN AEYRT
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|