Pseudomonas fluorescens SF39a, NX10_RS06815

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas fluorescens strain SF39a contig_3, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
TCTTGCTCATGTAAACCCGCAGCGGCTCGGTGATGTTGATGCGGTCGTCGATGTGTTGATCGAGCAGCAACTGAATCAACTCGCGCTTGAGGGTCATGGT GGTTTCCGACGCCTTCGCCCAAACGAATTCACTGGCCGGGATGATGCCGTCGTCGGCCACGTCCATGCCGAACGAATCTTCGCTGAAGCGCACGATGTAC TGACCGGTCTTGCGGTTGAGGCCGACGAAGCCCTTGAGATCGTCGGCGGCCTGGCAGATGAGTTGGGAGGTGATGCGCATGGTAAACCTCACGAAAGATG ATCGATGGTTTACACGCAGGGCAACGCAGCGGCGCGCCCTCTGTCGGGACGTCTGCCGAGGGCAAGCCTACTGCAAACAGCGCCACAAAAGTGCAGGAAA TTTCCGTTTTGCTCGGTTTATGTCGGTCTGGCGATAGCCCTGCGGCGCTTCAGTTGTTAAAAGGTACGTCTCGAAAAAAACCTGCGAAAGGAACTCGACC
DNA Sequence for Gene
>NX10_RS06815
ATGCCTGCCACTTTTACCCGAAGCGCTCTGGTGCTGAGTCTGTTGTTCGGCCTCGGTCAGGCGCACGCCGCCAGCCACCCGGAGCCCAAGGCAATCGCTG CCGCCCATGGCATTCCGCATCCGGCGGTGATTGCCCACCGTGGCGCGTCGTTCGATGCCCCGGAATCCACCGCTGCGGCCTACAAACTGGCCCGTGACCT CGGCGCCGATTACCTGGAAATGGATTTGCAGCGCAGCAAGGACGGCGTGCTCTTCGCCCTGCACGACGACAACCTGCAACGCACCACCGACGTCGCCAGC AAATTCCCCGAGCGCAAGGACAGCCCGGCCACTGCGTTCACCATGGCCGAACTGAAAACCCTTGATGCCGGCAGCTGGTTCAACAGCAAATATCCTGACC GCGCACGCCCCTCCTACGCCGGGCTGAAGATTCTTACCCTCGATGAAATCATCGACATCGCCCGCGCCAACCCGCAGCACAAGCCGGGCCTGTACATCGA GACCAAGGAGCCGCAGCTGTTTCCCGGCATCGAACATGACCTCAAGGAAAAACTGCAGGATCGCGGCTGGCTGAGTCCGGCCGGTTCGAAACTGGCGAAA AGTGCGCTGGGCGTCGGTCAGGGCAAAGGCAAGGTGATCCTGCAGACGTTCGACAAATCCAGCCTTGAACTGCTGGAGAAAGAAATGCCGCAAGTGCCGA AGATCCTGCTGTTGTGGGTCGGTGAAGGCAGCATCGAGCCGAAATCCGCCGTGACGTTTGCCGCGTCCGGCGAGAAAGACAAAAACGTGTTCTACGGCAA GCAGGAGCCAAAATCCGAAGCTGAATTCAAGCAATGGGTCGATTACGCCAAGGCGCAGGGCGCGATCGGCACCGGCCCGTCGGCGAAGCTGACCCATGGT GGTGATCAGAGTTATTCCGACCTGGTGCAACCGTGGATGAATCAGTACACCCACGATCAGGGCATGCTGGTGCATGTTTATACGGTCGACGAGGCGGTGG ACTACGAGAAAGTCATGGCAGCGGGGGTTGATGGCATCTTCACCAACCGCGCCAGTGAACTGTTGAAGTTTTACAAGCGTCCGGCGGCTGGCAGTGTTGA TGAAGTTTTGAAGAAGAACGGTTTCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CTGTTATCGAATCGTCTGCTTCGCGAGCAGGCTCGCTCCCACGAAGAGCAGTTTTATCGCGAGGCAGAGATTTAAGGGTGAGTTAAGTTGCGCTGGTTAA TCTGAACCCACTTACACAGATCAACCACTTCAACGCACTGCCAAGGAATGAACCGATGAAAACTTTGACTGCCCTGTTTACCGCCGCTGCCCTGACCCTC ACCGCTGGCCTGGCTCAGGCTGATGTTCGCATCGACCAAGTGCCGCAACTGGTCAAGGACGGCAAGATCAAGTCGCTGGAATCGATGAACGCCGAAGCAC TGAAATTGCACCCGGGCGCAACGATTACCGACACCGACCTGGATAACCACTTCAACGGTTACGAGTACGAAGTTGAACTTAAAACCGCTGACGGCAAAGA GTTCGACGTGGACTTTGATGCCACCACCGGTAAAGTGCTGAGCAACAAGCAAGACACTTGATAGACCGCTGTTAAAGAGCCGCACGATTGAAAGATCGTG
Amino Acid Sequence
>glycerophosphodiester phosphodiesterase
MPATFTRSALVLSLLFGLGQAHAASHPEPKAIAAAHGIPHPAVIAHRGASFDAPESTAAAYKLARDLGADYLEMDLQRSKDGVLFALHDDNLQRTTDVAS KFPERKDSPATAFTMAELKTLDAGSWFNSKYPDRARPSYAGLKILTLDEIIDIARANPQHKPGLYIETKEPQLFPGIEHDLKEKLQDRGWLSPAGSKLAK SALGVGQGKGKVILQTFDKSSLELLEKEMPQVPKILLLWVGEGSIEPKSAVTFAASGEKDKNVFYGKQEPKSEAEFKQWVDYAKAQGAIGTGPSAKLTHG GDQSYSDLVQPWMNQYTHDQGMLVHVYTVDEAVDYEKVMAAGVDGIFTNRASELLKFYKRPAAGSVDEVLKKNGF
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site